selected publications
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academic article
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Sidwell TLiao YGarnham ALVasanthakumar AGloury RBlume JTeh PPChisanga DThelemann Cde Labastida Rivera FEngwerda CRCorcoran LKometani KKurosaki TSmyth GKShi WKallies A. Attenuation of TCR-induced transcription by Bach2 controls regulatory T cell differentiation and homeostasis.
Nature Communications.
11:1-17.
2020
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Utzschneider DTGabriel SSChisanga DGloury RGubser PMVasanthakumar AShi WKallies A. Early precursor T cells establish and propagate T cell exhaustion in chronic infection.
Nature Immunology.
2020
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Vasanthakumar AChisanga DBlume JGloury RBritt KHenstridge DCZhan YTorres SVLiene SCollins NCao ESidwell TLi CSpallanzani RGLiao YBeavis PAGebhardt TTrevaskis NNutt SLZajac JDDavey RAFebbraio MAMathis DShi WKallies A. Sex-specific adipose tissue imprinting of regulatory T cells.
Nature.
579:581-585.
2020
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Zhao KBleackley MChisanga DGangoda LFonseka PLiem MKalra HAl Saffar HKeerthikumar SAng C-SAdda CGJiang LYap KPoon IKLock PBulone VAnderson MMathivanan S. Extracellular vesicles secreted by Saccharomyces cerevisiae are involved in cell wall remodelling.
Communications Biology.
2.
2019
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Murphy CMuscat AAshley DMukaro VWest LLiao YChisanga DShi WCollins IBaron-Hay SPatil SLindeman GKhasraw M. Tailored NEOadjuvant epirubicin, cyclophosphamide and Nanoparticle Albumin-Bound paclitaxel for breast cancer: The phase II NEONAB trial—Clinical outcomes and molecular determinants of response.
PLoS ONE.
14.
2019
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Chisanga DKeerthikumar SMathivanan SChilamkurti N. Integration of heterogeneous ‘omics’ data using semi-supervised network labelling to identify essential genes in colorectal cancer.
Computers and Electrical Engineering.
67:267-277.
2018
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Pathan MKeerthikumar SChisanga DAlessandro RAng C-SAskenase PBatagov AOBenito-Martin ACamussi GClayton ACollino FDi Vizio DFalcon-Perez JMFonseca PFonseka HPPFontana SGho YSHendrix AHoen EN-TIraci NKastaniegaard KKislinger TKowal JKurochkin IVLeonardi TLiang YLlorente ALunavat TRMaji SMonteleone FØverbye APanaretakis TPatel TPeinado HPluchino SPrincipe SRonquist GRoyo FSahoo SSpinelli CStensballe AThéry Cvan Herwijnen MJCWauben MWelton JLZhao KMathivanan S. A novel community driven software for functional enrichment analysis of extracellular vesicles data.
Journal of Extracellular Vesicles.
6:1-4.
2017
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Samuel MChisanga DLiem MKeerthikumar SAnand SAng C-SAdda CGVersteegen EJois MMathivanan S. Bovine milk-derived exosomes from colostrum are enriched with proteins implicated in immune response and growth.
Scientific Reports.
7:1-10.
2017
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Chisanga DKeerthikumar SPathan MAriyaratne DKalra HBoukouris SMathew NAAl Saffar HGangoda LAng C-SSieber OMMariadason JMDasgupta RChilamkurti NMathivanan S. Colorectal cancer atlas: an integrative resource for genomic and proteomic annotations from colorectal cancer cell lines and tissues.
Nucleic Acids Research.
44:D969-D974.
2016
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Keerthikumar SChisanga DAriyaratne DAl Saffar HAnand SZhao KSamuel MPathan MJois MChilamkurti NGangoda LMathivanan S. ExoCarta: A Web-Based Compendium of Exosomal Cargo.
Journal of Molecular Biology.
428:688-692.
2016
Full text if available
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Sidwell TLiao YGarnham ALVasanthakumar AGloury RBlume JTeh PPChisanga DThelemann Cde Labastida Rivera FEngwerda CRCorcoran LKometani KKurosaki TSmyth GKShi WKallies A. Attenuation of TCR-induced transcription by Bach2 controls regulatory T cell differentiation and homeostasis.
Nature Communications.
11:1-17.
2020
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chapter
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Chisanga DKeerthikumar SSMathivanan SChilamkurti NK. Network tools for the analysis of proteomic data.
Methods in Molecular Biology.
177-197.
2017
Full text if available
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Chisanga DKeerthikumar SSMathivanan SChilamkurti NK. Network tools for the analysis of proteomic data.
Methods in Molecular Biology.
177-197.
2017