selected publications
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academic article
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Meng XLi LNarsai RDe Clercq IWhelan JBerkowitz O. Mitochondrial signalling is critical for acclimation and adaptation to flooding in Arabidopsis thaliana.
The Plant Journal.
103.
2020
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Meng XLi LDe Clercq INarsai RXu YHartmann ALozano Claros DCustovic ELewsey MGWhelan JBerkowitz O. ANAC017 coordinates organellar functions and stress responses by reprogramming retrograde signaling.
Plant Physiology.
180:634-653.
2019
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Li LLavell AMeng XBerkowitz OSelinski Jvan de Meene ACarrie CBenning CWhelan JDe Clercq IWang Y. Arabidopsis DGD1 SUPPRESSOR 1 is a Subunit of the Mitochondrial Contact Site and Cristae Organizing System and Affects Mitochondrial Biogenesis.
The Plant Cell.
31:1856-1878.
2019
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Xu YBerkowitz ONarsai RDe Clercq IHooi MBulone VVan Breusegem FWhelan JWang Y. Mitochondrial function modulates touch signalling in Arabidopsis thaliana.
The Plant Journal.
97:623-645.
2019
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Osorio MBNg SBerkowitz ODe Clercq IMao CShou HWhelan JJost R. SPX4 Acts on PHR1-Dependent and -Independent Regulation of Shoot Phosphorus Status in Arabidopsis.
Plant Physiology.
181:332-352.
2019
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Zhang XIvanova AVandepoele KRadomiljac JVan de Velde JBerkowitz OWillems PXu YNg SVan Aken ODuncan OZhang BStorme VChan KXVaneechoutte DPogson BJVan Breusegem FWhelan JDe Clercq I. The transcription factor MYB29 Is a regulator of ALTERNATIVE OXIDASE1a.
Plant Physiology.
173:1824-1843.
2017
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Zwack PJDe Clercq IHowton TCHallmark HTHurny AKeshishian EAParish AMBenkova EMukhtar MSVan Breusegem FRashotte AM. Cytokinin response factor 6 represses cytokinin-associated genes during oxidative stress.
Plant Physiology.
172:1249-1258.
2016
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Berkowitz ODe Clercq IVan Breusegem FWhelan J. Interaction between hormonal and mitochondrial signalling during growth, development and in plant defence responses.
Plant, Cell and Environment.
39:1127-1139.
2016
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Van Aken ODe Clercq IIvanova ALaw SRVan Breusegem FMillar AHWhelan J. Mitochondrial and chloroplast stress responses are modulated in distinct touch and chemical inhibition phases.
Plant Physiology.
171:2150-2165.
2016
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Hu ZVanderhaeghen RCools TWang YDe Clercq ILeroux OLong NBelt KMillar AHAudenaert DHilson PSmall IMouille GVernhettes SVan Breusegem FWhelan JHofte HDe Veylder L. Mitochondrial defects confer tolerance against cellulose deficiency.
The Plant Cell.
28:2276-2290.
2016
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Šimášková MO'Brien JAKhan MVan Noorden GÖtvös KVieten ADe Clercq IVan Haperen JMACuesta CHoyerová KVanneste SMarhavý PWabnik KVan Breusegem FNowack MMurphy AFriml JWeijers DBeeckman TBenková E. Cytokinin response factors regulate PIN-FORMED auxin transporters.
Nature Communications.
6.
2015
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Vermeirssen VDe Clercq IVan Parys TVan Breusegem FVan de Peer Y. Arabidopsis ensemble reverse-engineered gene regulatory network discloses interconnected transcription factors in oxidative stress.
The Plant Cell.
26:4656-4679.
2014
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Kerchev PIDe Clercq IDenecker JMühlenbock PKumpf RNguyen LAudenaert DDejonghe WVan Breusegem F. Mitochondrial perturbation negatively affects auxin signaling.
Molecular Plant.
7:1138-1150.
2014
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Ng SIvanova ADuncan OLaw SRVan Aken ODe Clercq IWang YCarrie CXu LKmiec BWalker HVan Breusegem FWhelan JGiraud E. A Membrane-Bound NAC Transcription Factor, ANAC017, Mediates Mitochondrial Retrograde Signaling in Arabidopsis.
The Plant Cell.
25:3450-3471.
2013
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De Clercq IVermeirssen VVan Aken OVandepoele KMurcha MWLaw SRInzé ANg SIvanova ARombaut Dvan de Cotte BJaspers PVan de Peer YKangasjärvi JWhelan JVan Breusegem F. The Membrane-Bound NAC Transcription Factor ANAC013 Functions in Mitochondrial Retrograde Regulation of the Oxidative Stress Response in Arabidopsis.
The Plant Cell.
25:3472-3490.
2013
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Petrov VVermeirssen VDe Clercq IVan Breusegem FMinkov IVandepoele KGechev TS. Identification of cis-regulatory elements specific for different types of reactive oxygen species in Arabidopsis thaliana.
Gene.
499:52-60.
2012
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Tognetti VBVan Aken OMorreel KVandenbroucke Kvan de Cotte BDe Clercq IChiwocha SFenske RPrinsen EBoerjan WGenty BStubbs KAInzé DVan Breusegem F. Perturbation of Indole-3-Butyric Acid Homeostasis by the UDP-Glucosyltransferase UGT74E2 Modulates Arabidopsis Architecture and Water Stress Tolerance.
The Plant Cell.
22:2660-2679.
2010
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Skirycz ADe Bodt SObata TDe Clercq IClaeys HDe Rycke RAndriankaja MVan Aken OVan Breusegem FFernie ARInzé D. Developmental Stage Specificity and the Role of Mitochondrial Metabolism in the Response of Arabidopsis Leaves to Prolonged Mild Osmotic Stress.
Plant Physiology.
152:226-244.
2010
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De Clercq IADe Meirleir L. Respiratory chain complex V deficiency due to a mutation in the assembly gene ATP12.
Journal of Medical Genetics.
41:120-124.
2004
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De Clercq IVan de Velde JLuo XLiu LStorme VPottie RVaneechoutte DVan Breusegem FVandepoele K. Unraveling transcription factor functions through integrative inference of transcriptional networks in Arabidopsis thaliana yields novel regulators involved in reactive oxygen species stress signaling
Full text if available
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Meng XLi LNarsai RDe Clercq IWhelan JBerkowitz O. Mitochondrial signalling is critical for acclimation and adaptation to flooding in Arabidopsis thaliana.
The Plant Journal.
103.
2020