academic article

• Dolferus RThavamanikumar SSangma HKleven SWallace XForrest KRebetzke GHayden MBorg LSmith ACullis B. Determining the genetic architecture of reproductive stage drought tolerance in wheat using a correlated trait and correlated marker effect model.  G3: Genes, Genomes, Genetics.  9:473-489. 2019
• Sahab SHayden MJMason JSpangenberg G. Mesophyll protoplasts and PEG-mediated transfections: Transient assays and generation of stable transgenic canola plants.  Methods in Molecular Biology.  1864:131-152. 2019
• Eagles HAHyles JWilson JCane KForrest KLHayden MJRamm KTrevaskis B. A Linked SNP Marker to Genotype Fr-B2 in Wheat.  Crop and Pasture Science.  69:859-863. 2018
• Qureshi NBariana HKumran VVMuruga SForrest KLHayden MJBansal U. A new leaf rust resistance gene Lr79 mapped in chromosome 3BL from the durum wheat landrace Aus26582.  Theoretical and Applied Genetics: international journal of plant breeding research.  131:1091-1098. 2018
• Kolmer JABernardo ABai GHayden MChao S. Adult plant leaf rust resistance derived from Toropi wheat is conditioned by Lr78 and three minor QTL.  Phytopathology: International Journal of the American Phytopathological Society.  108:246-253. 2018
• Kolmer JAGarvin DFHayden MSpielmeyer W. Adult plant leaf rust resistance derived from the wheat landrace cultivar Americano 44d is conditioned by interaction of three QTL.  Euphytica: international journal on plant breeding.  214:1-11. 2018
• Nsabiyera VBariana HSQureshi NWong DHayden MJBansal UK. Characterisation and mapping of adult plant stripe rust resistance in wheat accession Aus27284.  Theoretical and Applied Genetics: international journal of plant breeding research.  131:1459-1467. 2018
• Qureshi NKandiah PGessese MKNsabiyera VWells VBabu PWong DHayden MBariana HBansal U. Development of co-dominant KASP markers co-segregating with Ug99 effective stem rust resistance gene Sr26 in wheat.  Molecular Breeding: new strategies in plant improvement.  38:1-9. 2018
• Qureshi NBariana HSZhang PMcIntosh RBansal UKWong DHayden MJDubcovsky JShankar M. Genetic Relationship of Stripe Rust Resistance Genes Yr34 and Yr48 in Wheat and Identification of Linked KASP Markers.  Plant Disease: an international journal of applied plant pathology.  102:413-420. 2018
• Hill CBAngessa TTMcFawn LAWong DTibbits JZhang XQForrest KMoody DTelfer PWestcott SDiepeveen DXu YTan CHayden MLi C. Hybridisation-based target enrichment of phenology genes to dissect the genetic basis of yield and adaptation in barley.  Plant Biotechnology Journal.  2018
• Randhawa MSLan CBasnet BRBhavani SHuerta-Espino JForrest KLHayden MJSingh RP. Interactions among genes Sr2/Yr30, Lr34/Yr18/Sr57 and Lr68 confer enhanced adult plant resistance to rust diseases in common wheat (Triticum aestivum L.) line 'Arula'.  Australian Journal of Crop Science.  12:1023-1033. 2018
• Keeble-Gagnère GRigault PTibbits JPasam RHayden MForrest KFrenkel ZKorol AHuang BECavanagh CTaylor JAbrouk MSharpe AKonkin DSourdille PDarrier BChoulet FBernard ARochfort SDimech AWatson-Haigh NBaumann UEckermann PFleury DJuhasz ABoisvert SNolin MADoležel JŠimková HToegelová HŠafář JLuo MCCâmara FPfeifer MIsdale DNyström-Persson JKoo DHTinning MCui DRu ZAppels R. Optical and physical mapping with local finishing enables megabase-scale resolution of agronomically important regions in the wheat genome.  Genome Biology: biology for the post-genomic era.  19:1-18. 2018
• Finnegan EJFord BWallace XPettolino FGriffin PTSchmitz RJZhang PBarrero JMHayden MJBoden SACavanagh CASwain SMTrevaskis B. Zebularine treatment is associated with deletion of FT-B1 leading to an increase in spikelet number in bread wheat.  Plant, Cell and Environment.  41:1346-1360. 2018
• Ran YPatron NKay PWong DBuchanan MCao YYSawbridge TDavies JPMason JWebb SRSpangenberg GAinley WMWalsh TAHayden MJ. Zinc finger nuclease-mediated precision genome editing of an endogenous gene in hexaploid bread wheat (Triticum aestivum) using a DNA repair template.  Plant Biotechnology Journal.  16:2088-2101. 2018
• Hayes BPanozzo JWalker CKChoy ALKant SWong DTibbits JDaetwyler HRochfort SHayden MSpangenberg G. Accelerating wheat breeding for end-use quality with multi-trait genomic predictions incorporating near infrared and nuclear magnetic resonance-derived phenotypes.  Theoretical and Applied Genetics: international journal of plant breeding research.  130:2505-2519. 2017
• Liu MRathjen TWeligama KForrest KHayden MDelhaize E. Analysis of aneuploid lines of bread wheat to map chromosomal locations of genes controlling root hair length.  Annals of Botany.  119:1333-1341. 2017
• Pasam RKBansal UDaetwyler HForrest KLWong DPetkowski JWilley NRandhawa MChhetri MMiah HTibbits JBariana HHayden M. Detection and validation of genomic regions associated with resistance to rust diseases in a worldwide hexaploid wheat landrace collection using BayesR and mixed linear model approaches.  Theoretical and Applied Genetics: international journal of plant breeding research.  130:777-793. 2017
• Chhetri MBariana HWong DSohail YHayden MBansal U. Development of robust molecular markers for marker-assisted selection of leaf rust resistance gene Lr23 in common and durum wheat breeding programs.  Molecular Breeding: new strategies in plant improvement.  37:1-8. 2017
• Shi FTibbits JPasam RKKay PWong DPetkowski JForrest KLHayes BAkhunova ADavies JWebb SSpangenberg GAkhunov EHayden MDaetwyler H. Exome sequence genotype imputation in globally diverse hexaploid wheat accessions.  Theoretical and Applied Genetics: international journal of plant breeding research.  130:1393-1404. 2017
• Qureshi NBariana HForrest KHayden MKeller BWicker TFaris JSalina EBansal U. Fine mapping of the chromosome 5B region carrying closely linked rust resistance genes Yr47 and Lr52 in wheat.  Theoretical and Applied Genetics: international journal of plant breeding research.  130:495-504. 2017
• Joukhadar RDaetwyler HDBansal UKGendall ARHayden MJ. Genetic diversity, population structure and ancestral origin of Australian wheat.  Frontiers in Plant Science.  8:1-15. 2017
• Shorinola OBalcárková BHyles JTibbits JFGHayden MJHolušova KValárik MDistelfeld ATorada ABarrero JMUauy C. Haplotype analysis of the pre-harvest sprouting resistance locus phs-a1 reveals a causal role of TamKK3-a in global germplasm.  Frontiers in Plant Science.  8:1-14. 2017
• Obsa BTEglinton JCoventry SMarch TGuillaume MLe TPHayden MLangridge PFleury D. Quantitative trait loci for yield and grain plumpness relative to maturity in three populations of barley (Hordeum vulgare L.) grown in a low rain-fall environment.  PLoS ONE.  12:1-17. 2017
• Stenson PMort MBall EVEvans KHayden MHeywood SHussain MPhillips ADCooper DN. The Human Gene Mutation Database: towards a comprehensive repository of inherited mutation data for medical research, genetic diagnosis and next-generation sequencing studies.  Human Genetics.  136:665-677. 2017
• Bariana HForrest KQureshi NMiah HHayden MBansal U. Adult plant stripe rust resistance gene Yr71 maps close to Lr24 in chromosome 3D of common wheat.  Molecular Breeding: new strategies in plant improvement.  36:1-10. 2016
• Bassi FMGhavami FHayden MJWang YForrest KLKong SDizon RMichalak de Jimenez MKMeinhardt SWMergoum MGu YQKianian SF. Fast-forward genetics by radiation hybrids to saturate the locus regulating nuclear-cytoplasmic compatibility in Triticum.  Plant Biotechnology Journal.  14:1716-1726. 2016
• Nsabiyera VQureshi NBariana HSWong DForrest KLHayden MJBansal UK. Molecular markers for adult plant leaf rust resistance gene Lr48 in wheat.  Molecular Breeding: new strategies in plant improvement.  36. 2016
• Miraghazadeh AZhang PHarding CHossain SHayden MWong DSpielmeyer WChandler PM. The use of SNP hybridisation arrays and cytogenetics to characterise deletions of chromosome 4B in hexaploid wheat (Triticum aestivum L.).  Theoretical and Applied Genetics: international journal of plant breeding research.  129:2151-2160. 2016
• Jordan KWWang SLun YGardiner LJMacLachlan RHucl PWiebe KWong DForrest KLSharpe AGSidebottom CHDHall NToomajian CClose TDubcovsky JAkhunova ATalbert LBansal UKBariana HSHayden MJPozniak CJeddeloh JAHall AAkhunov E. A haplotype map of allohexaploid wheat reveals distinct patterns of selection on homoeologous genomes.  Genome Biology: biology for the post-genomic era.  16:48. 2015
• Nguyen VFleury DTimmins ALaga HHayden MMather DOkada T. Addition of rye chromosome 4R to wheat increases anther length and pollen grain number.  Theoretical and Applied Genetics: international journal of plant breeding research.  128:953-964. 2015
• Jayatilake DVTucker EJBrueggemann JLewis JGarcia MDreisigacker SHayden MJChalmers KMather DE. Genetic mapping of the Cre8 locus for resistance against cereal cyst nematode (Heterodera avenae Woll.) in wheat.  Molecular Breeding: new strategies in plant improvement.  35. 2015
• Pujol VForrest KLZhang PRouse MNHayden MJHuang LTabe LLagudah E. Identification of a stem rust resistance locus effective against Ug99 on wheat chromosome 7AL using a RAD-Seq approach.  Theoretical and Applied Genetics: international journal of plant breeding research.  128:1397-1405. 2015
• Bansal UKMuhammad SForrest KLHayden MJBariana HS. Mapping of a new stem rust resistance gene Sr49 in chromosome 5B of wheat.  Theoretical and Applied Genetics: international journal of plant breeding research.  128:2113-2119. 2015
• Daetwyler HDHayden MJSpangenberg GCHayes BJ. Selection on Optimal Haploid Value Increases Genetic Gain and Preserves More Genetic Diversity Relative to Genomic Selection.  Genetics: a periodical record of investigations bearing on heredity and variation.  200:1341-1348. 2015
• Barrero JMCavanagh CVerbyla KLTibbits JFGVerbyla APHuang BERosewarne GMStephen SWang PWhan ARigault PHayden MJGubler F. Transcriptomic analysis of wheat near-isogenic lines identifies PM19-A1 and A2 as candidates for a major dormancy QTL.  Genome Biology: biology for the post-genomic era.  16:1-18. 2015
• Knight MIDaetwyler HDHayes BJHayden MJBall AJPethick DWMcDonagh MB. An independent validation association study of carcass quality, shear force, intramuscular fat percentage and omega-3 polyunsaturated fatty acid content with gene markers in Australian lamb.  Meat Science.  96:1025-1033. 2014
• Wang SWong DForrest KAllen AChao SHuang BEMaccaferri MSalvi SMilner SGCattivelli LMastrangelo AMWhan AStephen SBarker GWieseke RPlieske JLillemo MMather DAppels RDolferus RBrown-Guedira GKorol AAkhunova ARFeuillet CSalse JMorgante MPozniak CLuo M-CDvorak JMorell MDubcovsky JGanal MTuberosa RLawley CMikoulitch ICavanagh CEdwards KJHayden MAkhunov E. Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array.  Plant Biotechnology Journal.  12:787-796. 2014
• Forrest KPujol VBulli PPumphrey MWellings CHerrera-Foessel SHuerta-Espino JSingh RLagudah EHayden MSpielmeyer W. Development of a SNP marker assay for the Lr67 gene of wheat using a genotyping by sequencing approach.  Molecular Breeding: new strategies in plant improvement.  34:2109-2118. 2014
• Daetwyler HBansal UBariana HHayden MHayes B. Genomic prediction for rust resistance in diverse wheat landraces.  Theoretical and Applied Genetics: international journal of plant breeding research.  127:1795-1803. 2014
• Bansal UBariana HWong DRandhawa MWicker THayden MKeller B. Molecular mapping of an adult plant stem rust resistance gene Sr56 in winter wheat cultivar Arina.  Theoretical and Applied Genetics: international journal of plant breeding research.  127:1441-1448. 2014
• Hayden MJBonneau J. Multiplex-Ready Technology for Mid-Throughput Genotyping of Molecular Markers.  Methods in Molecular Biology.  1145:47-57. 2014
• Linsell KJRahman MSTaylor JDDavey RSGogel BJWallwork HForrest KLHayden MJTaylor SPOldach KH. QTL for resistance to root lesion nematode (Pratylenchus thornei) from a synthetic hexaploid wheat source.  Theoretical and Applied Genetics: international journal of plant breeding research.  127:1409-1421. 2014
• Wallwork HGrcic MLi CDHayden MJChalmers KMather DE. Use of specific differential isolates of Rhynchosporium commune to detect minor gene resistance to leaf scald in barley seedlings.  Australasian Plant Pathology.  43:197-203. 2014
• Zhang JDell BBiddulph BDrake-Brockman FWalker EKhan NWong DHayden MAppels R. Wild-type alleles of Rht-B1 and Rht-D1 as independent determinants of thousand-grain weight and kernel number per spike in wheat.  Molecular Breeding: new strategies in plant improvement.  32:771-783. 2013
• Cavanagh CRChao SWang SHuang BEStephen SKiani SForrest KSaintenac CBrown-Guedira GLAkhunova ASee DBai GPumphrey MTomar LWong DKong SReynolds Mda Silva MLBockelman HTalbert LAnderson JADreisigacker SBaenziger SCarter AKorzun VMorrell PLDubcovsky JMorell MKSorrells MEHayden MJAkhunov E. Genome-wide comparative diversity uncovers multiple targets of selection for improvement in hexaploid wheat landraces and cultivars.  Proceedings of the National Academy of Sciences of USA.  110:8057-8062. 2013
• Akhunov EDSehgal SLiang HWang SAkhunova ARKaur GLi WForrest KLSee DSimkova HMa YHayden MJLuo MFaris JDDolezel JGill BS. Comparative Analysis of Syntenic Genes in Grass Genomes Reveals Accelerated Rates of Gene Structure and Coding Sequence Evolution in Polyploid Wheat.  Plant Physiology.  161:252-265. 2013
• Sandhu KSForrest KLKong SBansal UKSingh DHayden MJPark RF. Inheritance and molecular mapping of a gene conferring seedling resistance against Puccinia hordei in the barley cultivar Ricardo.  Theoretical and Applied Genetics: international journal of plant breeding research.  125:1403-1411. 2012
• Huang BEGeorge AWForrest KLKilian AHayden MJMorell MKCavanagh CR. A multiparent advanced generation inter-cross population for genetic analysis in wheat.  Plant Biotechnology Journal.  10:826-839. 2012
• Edwards DWilcox SBarrero RAFleury DCavanagh CRForrest KLHayden MJMoolhuijzen PKeeble-Gagnère GBellgard MILorenc MTShang CABaumann UTaylor JMMorell MKLangridge PAppels RFitzgerald A. Bread matters: a national initiative to profile the genetic diversity of Australian wheat.  Plant Biotechnology Journal.  10:703-708. 2012
• Lai KDuran CBerkman PJLorenc MTStiller JManoli SHayden MJForrest KLFleury DBaumann UZander MMason ASBatley JEdwards D. Single nucleotide polymorphism discovery from wheat next-generation sequence data.  Plant Biotechnology Journal.  10:743-749. 2012
• Knight MIDaetwyler HDHayes BJHayden MJBall AJPethick DWMcDonagh MB. Discovery and trait association of single nucleotide polymorphisms from gene regions of influence on meat tenderness and long-chain omega-3 fatty acid content in Australian lamb.  Animal Production Science.  52:591-600. 2012
• Rosewarne GMSingh RPHuerta-Espino JHerrera-Foessel SAForrest KLHayden MJRebetzke GJ. Analysis of leaf and stripe rust severities reveals pathotype changes and multiple minor QTLs associated with resistance in an Avocet × Pastor wheat population.  Theoretical and Applied Genetics: international journal of plant breeding research.  124:1283-1294. 2012
• Schreiber AWHayden MJForrest KLKong SLLangridge PBaumann U. Transcriptome-scale homoeolog-specific transcript assemblies of bread wheat.  BMC Genomics.  13:492-492. 2012
• Bansal UKForrest KLHayden MJMiah HSingh DBariana HS. Characterisation of a new stripe rust resistance gene Yr47 and its genetic association with the leaf rust resistance gene Lr52.  Theoretical and Applied Genetics: international journal of plant breeding research.  122:1461-1466. 2011
• Munoz-Amatriain MMoscou MJBhat PRSvensson JTBartos JSuchankova PSimkova HEndo TRFenton RDLonardi SCastillo AMChao SCistue LCuesta-Marcos AForrest KLHayden MJHayes PMHorsley RDMakoto KMoody DSato KValles MPWulff BBHMuehlbauer GJDolezel JClose TJ. An Improved Consensus Linkage Map of Barley Based on Flow-Sorted Chromosomes and Single Nucleotide Polymorphism Markers.  Plant Genome.  4:238-249. 2011
• Cakir MGupta SLi CHayden MMather DEAblett GAPlatz GJBroughton SChalmers KJLoughman RJones MGKLance RCM. Genetic mapping and QTL analysis of disease resistance traits in the barley population Baudin�נAC Metcalfe.  Crop and Pasture Science.  62:152-152. 2011
• Herrera-Foessel SALagudah ESHuerta-Espino JHayden MJBariana HSSingh DSingh RP. New slow-rusting leaf rust and stripe rust resistance genes Lr67 and Yr46 in wheat are pleiotropic or closely linked.  Theoretical and Applied Genetics: international journal of plant breeding research.  122:239-249. 2011
• Hiebert CWThomas JBMcCallum BDHumphreys DGDePauw RMHayden MJMago RSchnippenkoetter WSpielmeyer W. An introgression on wheat chromosome 4DL in RL6077 (Thatcher*6/PI 250413) confers adult plant resistance to stripe rust and leaf rust (Lr67).  Theoretical and Applied Genetics: international journal of plant breeding research.  121:1083-1091. 2010
• Singh BBansal UKForrest KLHayden MJHare RABariana HS. Inheritance and chromosome location of leaf rust resistance in durum wheat cultivar Wollaroi.  Euphytica: international journal on plant breeding.  175:351-355. 2010
• Zhou MPHayden MJZhang ZYLu WZMa H-X. Saturation and mapping of a majorFusarium head blight resistance QTL on chromosome 3BS of Sumai 3 wheat.  Journal of Applied Genetics: an international journal of genetics and breeding.  51:19-25. 2010
• Hayden MJTabone TLNguyen TMCoventry SKeiper FJFox RLChalmers KJMather DEEglinton JK. An informative set of SNP markers for molecular characterisation of Australian barley germplasm.  Crop and Pasture Science.  61:70-70. 2010
• Bansal UKHayden MJGill MBBariana HS. Chromosomal location of an uncharacterised stripe rust resistance gene in wheat.  Euphytica: international journal on plant breeding.  171:121-127. 2010
• Bansal UKHayden MJKeller BWellings CRPark RFBariana HS. Relationship between wheat rust resistance genes Yr1 and Sr48 and a microsatellite marker.  Plant Pathology.  58:1039-1043. 2009
• Hayden MJTabone TMather DE. Development and assessment of simple PCR markers for SNP genotyping in barley.  Theoretical and Applied Genetics: international journal of plant breeding research.  119:939-951. 2009
• Tabone TMather DEHayden MJ. Temperature Switch PCR (TSP): Robust assay design for reliable amplification and genotyping of SNPs.  BMC Genomics.  10:580-580. 2009