selected publications
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academic article
- Narsai RSecco DSchultz MDEcker JRLister RWhelan J. Dynamic and rapid changes in the transcriptome and epigenome during germination and in developing rice (Oryza sativa) coleoptiles under anoxia and re-oxygenation. The Plant Journal. 89:805-824. 2017
- Narsai RGouil QSecco DSrivastava AKarpievitch YVLiew LCLister RLewsey MGWhelan J. Extensive transcriptomic and epigenomic remodelling occurs during Arabidopsis thaliana germination. Genome Biology: biology for the post-genomic era. 18:1-18. 2017
- Li SYing YSecco DWang CNarsai RWhelan JShou H. Molecular interaction between PHO2 and GIGANTEA reveals a new crosstalk between flowering time and phosphate homeostasis in Oryza sativa. Plant, Cell and Environment. 40:1487-1499. 2017
- Li LKubiszewski-Jakubiak SRadomiljac JWang YLaw SRKeech ONarsai RBerkowitz ODuncan OMurcha MWWhelan J. Characterization of a novel beta-barrel protein (AtOM47) from the mitochondrial outer membrane of Arabidopsis thaliana. Journal of Experimental Botany. 67:6061-6075. 2016
- Chrobok DLaw SRBrouwer BLinden PZiolkowska ALiebsch DNarsai RSzal BMoritz TRouhier NWhelan JGardestrom PKeech O. Dissecting the metabolic role of mitochondria during developmental leaf senescence. Plant Physiology. 172:2132-2153. 2016
- Wang YLyu WBerkowitz ORadomiljac JDLaw SRMurcha MWCarrie CTeixeira PFKmiec BDuncan OVan Aken ONarsai RGlaser EHuang SRoessner UMillar AHWhelan J. Inactivation of mitochondrial complex I induces the expression of a twin cysteine protein that targets and affects cytosolic, chloroplastidic and mitochondrial function. Plant Physiology Journal. 9:696-710. 2016
- Murcha MWKubiszewski-Jakubiak STeixeira PFGuegel ILKmiec BNarsai RIvanova AMegel CSchock AKraus SBerkowitz OGlaser EPhilippar KMarechal-Drouard LSoll JWhelan J. Plant-specific preprotein and amino acid transporter proteins are required for tRNA import into mitochondria. Plant Physiology. 172:2471-2490. 2016
- Yang JDing CXu BChen CNarsai RWhelan JHu ZZhang M. A Casparian strip domain-like gene, CASPL, negatively alters growth and cold tolerance. Scientific Reports. 5. 2015
- Kuehn KYin GDuncan OLaw SRKubiszewski-Jakubiak SKaur PMeyer EWang YSmall CCDFGiraud ENarsai RWhelan J. Decreasing Electron Flux through the Cytochrome and/or Alternative Respiratory Pathways Triggers Common and Distinct Cellular Responses Dependent on Growth Conditions. Plant Physiology. 167:228-250. 2015
- Murcha MWNarsai RDevenish JKubiszewski-Jakubiak SWhelan J. MPIC: A mitochondrial protein import components database for plant and non-plant species. Plant and Cell Physiology. 56:e10.1-e10.12. 2015
- Narsai REdwards JMRoberts THWhelan JJoss GHAtwell BJ. Mechanisms of growth and patterns of gene expression in oxygen-deprived rice coleoptiles. The Plant Journal. 82:25-40. 2015
- Wang LYing YNarsai RYe LZheng LTian JWhelan JShou H. Identification of OsbHLH133 as a regulator of iron distribution between roots and shoots in Oryza sativa. Plant, Cell and Environment. 36:224-236. 2014
- Law SRNarsai RWhelan J. Mitochondrial biogenesis in plants during seed germination. Mitochondrion. 19:214-221. 2014
- Law SRNarsai RWhelan J. Mitochondrial biogenesis in plants during seed germination. Mitochondrion. 19:214-221. 2014
- Wang YLaw SIvanova Avan Aken OKubiszewski-Jakubiak SNarsai RUggalla VVan Der Merwe MDuncan OWhelan JMurcha MW. The mitochondrial protein import component, translocase of the inner membrane17-1, plays a role in defining the timing of germination in arabidopsis. Plant Physiology. 166:1420-1435. 2014
- Narsai RNWang YMurcha MWWhelan J. The plant mitochondrial protein import apparatus - The differences make it interesting. BBA: General Subjects. 1840:1233-1245. 2014
- Shingaki-Wells RMillar AHWhelan JNarsai R. What happens to plant mitochondria under low oxygen? An omics review of the responses to low oxygen and reoxygenation. Plant, Cell and Environment. 37:2260-2277. 2014
- Narsai RDevenish JCastleden INarsai KXu LShou HWhelan J. Rice DB: an Oryza Information Portal linking annotation, subcellular location, function, expression, regulation, and evolutionary information for rice and Arabidopsis. The Plant Journal. 76:1057-1073. 2013
- Van Aken OZhang BLaw SNarsai RWhelan J. AtWRKY40 and AtWRKY63 Modulate the Expression of Stress-Responsive Nuclear Genes Encoding Mitochondrial and Chloroplast Proteins. Plant Physiology. 162:254-271. 2013
- Xu JYang JWu ZLiu HHuang FWu YCarrie CNarsai RMurcha MWhelan JWu P. Identification of a Dual-Targeted Protein Belonging to the Mitochondrial Carrier Family That Is Required for Early Leaf Development in Rice. Plant Physiology. 161:2036-2048. 2013
- Ng SGiraud EDuncan OLaw SRWang YXu LNarsai RCarrie CWalker HDay DABlanco NEStrand ÅWhelan JIvanova A. Cyclin-dependent Kinase E1 (CDKE1) Provides a Cellular Switch in Plants between Growth and Stress Responses. Journal of Biological Chemistry. 288:3449-3459. 2013
- Carrie CMurcha MWGiraud ENg SZhang MFNarsai RWhelan J. How do plants make mitochondria?. Planta: an international journal of plant biology. 237:429-439. 2013
- Narsai RWang CChen JWu JShou HWhelan J. Antagonistic, overlapping and distinct responses to biotic stress in rice (Oryza sativa) and interactions with abiotic stress. BMC Genomics. 14:93-93. 2013
- Narsai RWhelan J. How unique is the low oxygen response? An analysis of the anaerobic response during germination and comparison with abiotic stress in rice and Arabidopsis. Frontiers in Plant Science. 4. 2013
- Wang LYing YNarsai RYe LZheng LTian JWhelan JShou H. Identification of OsbHLH133 as a regulator of iron distribution between roots and shoots in Oryza sativa. Plant, Cell and Environment. 36:224-236. 2013
- Zhang BCarrie CIvanova ANarsai RMurcha MWDuncan OWang YLaw SRAlbrecht VPogson BGiraud EVan Aken OWhelan J. LETM Proteins Play a Role in the Accumulation of Mitochondrially Encoded Proteins in Arabidopsis thaliana and AtLETM2 Displays Parent of Origin Effects. Journal of Biological Chemistry. 287:41757-41773. 2012
- Davies SMKLopez Sanchez MIGNarsai RShearwood A-MJRazif MFMSmall IDWhelan JRackham OFilipovska A. MRPS27 is a pentatricopeptide repeat domain protein required for the translation of mitochondrially encoded proteins. FEBS Letters. 586:3555-3561. 2012
- Wang YCarrie CGiraud EElhafez DNarsai RDuncan OWhelan JMurcha MW. Dual Location of the Mitochondrial Preprotein Transporters B14.7 and Tim23-2 in Complex I and the TIM17:23 Complex in Arabidopsis Links Mitochondrial Activity and Biogenesis. The Plant Cell. 24:2675-2695. 2012
- Law SRNarsai RTaylor NLDelannoy ECarrie CGiraud EMillar AHSmall IWhelan J. Nucleotide and RNA Metabolism Prime Translational Initiation in the Earliest Events of Mitochondrial Biogenesis during Arabidopsis Germination. Plant Physiology. 158:1610-1627. 2012
- Narsai RLaw SRCarrie CXu LWhelan J. In-Depth Temporal Transcriptome Profiling Reveals a Crucial Developmental Switch with Roles for RNA Processing and Organelle Metabolism That Are Essential for Germination in Arabidopsis. Plant Physiology. 157:1342-1362. 2011
- Duncan OTaylor NLCarrie CEubel HKubiszewski-Jakubiak SZhang BNarsai RMillar AHWhelan J. Multiple Lines of Evidence Localize Signaling, Morphology, and Lipid Biosynthesis Machinery to the Mitochondrial Outer Membrane of Arabidopsis. Plant Physiology. 157:1093-1113. 2011
- Kühn KCarrie CGiraud EWang YMeyer EHNarsai Rdes Francs-Small CCZhang BMurcha MWWhelan J. The RCC1 family protein RUG3 is required for splicing of nad2 and complex I biogenesis in mitochondria of Arabidopsis thaliana. The Plant Journal. 67:1067-1080. 2011
- Narsai RRocha MGeigenberger PWhelan Jvan Dongen JT. Comparative analysis between plant species of transcriptional and metabolic responses to hypoxia. New Phytologist. 190:472-487. 2011
- Taylor NLHowell KAHeazlewood JLTan TYWNarsai RHuang SWhelan JMillar AH. Analysis of the Rice Mitochondrial Carrier Family Reveals Anaerobic Accumulation of a Basic Amino Acid Carrier Involved in Arginine Metabolism during Seed Germination. Plant Physiology. 154:691-704. 2010
- Huang STaylor NLNarsai REubel HWhelan JMillar AH. Functional and composition differences between mitochondrial complex II in Arabidopsis and rice are correlated with the complex genetic history of the enzyme. Plant Molecular Biology: an international journal on molecular biology, biochemistry and genetic engineering. 72:331-342. 2010
- Narsai RCastleden IWhelan J. Common and distinct organ and stress responsive transcriptomic patterns in Oryza sativa and Arabidopsis thaliana. BMC Plant Biology. 10:262-262. 2010
- Narsai RIvanova ANg SWhelan J. Defining reference genes in Oryza sativa using organ, development, biotic and abiotic transcriptome datasets. BMC Plant Biology. 10:56-56. 2010
- Narsai RHowell KACarroll AIvanova AMillar AHWhelan J. Defining Core Metabolic and Transcriptomic Responses to Oxygen Availability in Rice Embryos and Young Seedlings. Plant Physiology. 151:306-322. 2009
- Zheng LHuang FNarsai RWu JGiraud EHe FCheng LWang FWu PWhelan JShou H. Physiological and Transcriptome Analysis of Iron and Phosphorus Interaction in Rice Seedlings. Plant Physiology. 151:262-274. 2009
- Davies SMKRackham OShearwood A-MJHamilton KLNarsai RWhelan JFilipovska A. Pentatricopeptide repeat domain protein 3 associates with the mitochondrial small ribosomal subunit and regulates translation. FEBS Letters. 583:1853-1858. 2009
- Huang STaylor NLNarsai REubel HWhelan JMillar AH. Experimental Analysis of the Rice Mitochondrial Proteome, Its Biogenesis, and Heterogeneity. Plant Physiology. 149:719-734. 2008
- Howell KANarsai RCarroll AIvanova ALohse MUsadel BMillar AHWhelan J. Mapping Metabolic and Transcript Temporal Switches during Germination in Rice Highlights Specific Transcription Factors and the Role of RNA Instability in the Germination Process. Plant Physiology. 149:961-980. 2008
- Narsai RHowell KAMillar AHO'Toole NSmall IWhelan J. Genome-Wide Analysis of mRNA Decay Rates and Their Determinants in Arabidopsis thaliana. The Plant Cell. 19:3418-3436. 2007
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chapter
- Narsai R. Databases and informatics resources for analysis of plant mitochondria. Methods in Molecular Biology. 263-279. 2015