selected publications
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academic article
- Raglus TIDe Groef BRochfort SRawlin GMcCowan C. Bone Marrow Fat Analysis as a Diagnostic Tool to Document Ante-Mortem Starvation. The Veterinary Journal. 243:1-7. 2019
- Luke TRochfort SWales WJBonfatti VMarett LPryce JE. Metabolic profiling of early-lactation dairy cows using milk mid-infrared spectra. Journal of Dairy Science. 102:1747-1760. 2019
- Moate PJJacobs JLHannah MCMorris GLBeauchemin KAAlvarez Hess PSEckard RJLiu ZRochfort SWales WJWilliams SRO. Adaptation responses in milk fat yield and methane emissions of dairy cows when wheat was included in their diet for 16 weeks. Journal of Dairy Science. 101:7117-7132. 2018
- Ghamkhar KRochfort SBanik BKRevell C. Candidate metabolites for methane mitigation in the forage legume biserrula. Agronomy for Sustainable Development: sciences des productions vegetales et de l'environnement. 38:1-10. 2018
- Liu ZEzernieks VRochfort SCocks B. Comparison of methylation methods for fatty acid analysis of milk fat. Food Chemistry. 261:210-215. 2018
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Vassiliadis SPlummer KMPowell KSRochfort SJ. Elevated CO
2 and virus infection impacts wheat and aphid metabolism. Metabolomics. 14:1-13. 2018 - Miranda AFLiu ZRochfort SMouradov A. Lipid production in aquatic plant Azolla at vegetative and reproductive stages and in response to abiotic stress. Plant Physiology and Biochemistry. 124:117-125. 2018
- Liu ZRochfort SCocks B. Milk lipidomics: What we know and what we don't. Progress in Lipid Research. 71:70-85. 2018
- Keeble-Gagnère GRigault PTibbits JPasam RHayden MForrest KFrenkel ZKorol AHuang BECavanagh CTaylor JAbrouk MSharpe AKonkin DSourdille PDarrier BChoulet FBernard ARochfort SDimech AWatson-Haigh NBaumann UEckermann PFleury DJuhasz ABoisvert SNolin MADoležel JŠimková HToegelová HŠafář JLuo MCCâmara FPfeifer MIsdale DNyström-Persson JKoo DHTinning MCui DRu ZAppels R. Optical and physical mapping with local finishing enables megabase-scale resolution of agronomically important regions in the wheat genome. Genome Biology: biology for the post-genomic era. 19:1-18. 2018
- Vincent DMertens DRochfort S. Optimisation of Milk Protein Top-Down Sequencing Using In-Source Collision-Induced Dissociation in the Maxis Quadrupole Time-of-Flight Mass Spectrometer. Molecules. 23:1-22. 2018
- Cheng MWang ALiu ZGendall ARRochfort STang C. Sodium chloride decreases cadmium accumulation and changes the response of metabolites to cadmium stress in the halophyte Carpobrotus rossii. Annals of Botany. 122:373-385. 2018
- Vo QVRochfort SNam PCNguyen TLNguyen TTMechler A. Synthesis of aromatic and indole alpha-glucosinolates. Carbohydrate Research. 455:45-53. 2018
- Karpyn Esqueda MYen ALRochfort SGuthridge KMPowell KSEdwards JSpangenberg GC. A review of perennial ryegrass endophytes and their potential use in the management of african black beetle in perennial grazing systems in australia. Frontiers in Plant Science. 8:1-21. 2017
- Hayes BPanozzo JWalker CKChoy ALKant SWong DTibbits JDaetwyler HRochfort SHayden MSpangenberg G. Accelerating wheat breeding for end-use quality with multi-trait genomic predictions incorporating near infrared and nuclear magnetic resonance-derived phenotypes. Theoretical and Applied Genetics: international journal of plant breeding research. 130:2505-2519. 2017
- Miranda AFRamkumar NAndriotis CHöltkemeier TYasmin ARochfort SWlodkowic DMorrison PRoddick FSpangenberg GLal BSubudhi SMouradov A. Applications of microalgal biofilms for wastewater treatment and bioenergy production. Biotechnology for Biofuels. 10:1-23. 2017
- Rochfort SWyatt MALiebeke MSoutham ADViant MRBundy JG. Aromatic metabolites from the coelomic fluid of Eisenia earthworm species. European Journal of Soil Biology. 78:17-19. 2017
- Liu ZAuldist MWright MCocks BRochfort S. Bovine milk oligosaccharide contents show remarkable seasonal variation and intercow variation. Journal of Agricultural and Food Chemistry. 65:1307-1313. 2017
- Read EEdwards JDeseo MRawlin GRochfort S. Current Understanding of Acute Bovine Liver Disease in Australia. Toxins. 9. 2017
- Ekanayake PNKaur JTian PRochfort SJGuthridge KMSawbridge TISpangenberg GCForster JW. Genomic and metabolic characterisation of alkaloid biosynthesis by asexual Epichloë fungal endophytes of tall fescue pasture grasses. Genome. 60:496-509. 2017
- Liu ZEzernieks VWang JArachchillage NWGarner JBWales WJCocks BBRochfort S. Heat Stress in Dairy Cattle Alters Lipid Composition of Milk. Scientific Reports. 7:1-10. 2017
- Liu ZWang JCocks BGRochfort S. Seasonal Variation of Triacylglycerol Profile of Bovine Milk. Metabolites. 7:1-12. 2017
- Liu ZLogan ACocks BGRochfort S. Seasonal variation of polar lipid content in bovine milk. Food Chemistry. 237:865-869. 2017
- Liu ZRochfort SCocks BG. Optimization of a single phase method for lipid extraction from milk. Journal of Chromatography A. 1458:145-149. 2016
- Liu ZCocks BGRochfort S. Comparison of Molecular Species Distribution of DHA-Containing Triacylglycerols in Milk and Different Infant Formulas by Liquid Chromatography Mass-Spectrometry. Journal of Agricultural and Food Chemistry. 64:2134-2144. 2016
- Liu ZCocks BPatel AOglobline ARichardson GRochfort S. Identification and quantification of phosphatidylinositol in infant formulas by liquid chromatography-mass spectrometry. Food Chemistry. 205:178-186. 2016
- Vincent DEzernieks VElkins ANguyen NMoate PJCocks BGRochfort S. Milk bottom-up proteomics: Method optimization. Frontiers in Genetics. 6. 2016
- Vincent DEzernieks VElkins ANguyen NMoate PJCocks BGRochfort S. Milk bottom-up proteomics: method optimization. Frontiers in Genetics. 6. 2016
- Vincent DElkins ACondina MREzernieks VRochfort S. Quantitation and identification of intact major milk proteins for high-throughput LC-ESI-Q-TOF MS analyses. PLoS ONE. 11. 2016
- Vassiliadis SPlummer KMPowell KSTrebicki PLuck JERochfort SJ. The effect of elevated CO2 and virus infection on the primary metabolism of wheat. Functional Plant Biology: an international journal of plant function. 43:892-902. 2016
- Warner RDJacob RHRosenvold KRochfort STrenerry CPlozza TMcDonagh MB. Altered post-mortem metabolism identified in very fast chilled lamb M. longissimus thoracis et lumborum using metabolomic analysis. Meat Science. 108:155-164. 2015
- de Lucas APanter SMouradov ARochfort SSmith KFSpangenberg G. Assessment of nutritional characteristics of virus-resistant transgenic white clover (Trifolium repens L.) grown under field and glasshouse conditions. Molecular Breeding: new strategies in plant improvement. 35. 2015
- Liu ZMoate PCocks BRochfort S. Comprehensive polar lipid identification and quantification in milk by liquid chromatography-mass spectrometry. Journal of Chromatography B: Analytical Technologies in the Biomedical and Life Sciences. 978:95-102. 2015
- Kaur JEkanayake PNTian Pde Jong EVZDobrowolski MPRochfort SJMann RCSmith KFForster JWGuthridge KMSpangenberg GC. Discovery and characterisation of novel asexual Epichloe endophytes from perennial ryegrass (Lolium perenne L.). Crop and Pasture Science. 66:1058-1070. 2015
- Liu ZMoate PEzerniks VCocks BGRochfort S. Identification and quantification of triacylglycerols containing n-3 long-chain polyunsaturated fatty acids in bovine milk. Journal of Dairy Science. 98:8473-8485. 2015
- Liu ZRochfort S. Identification and quantitative analysis of oligosaccharides in wheat flour using LC-MS. Journal of Cereal Science. 63:128-133. 2015
- Rochfort SEzernieks VMele PKitching M. NMR metabolomics for soil analysis provide complementary, orthogonal data to MIR and traditional soil chemistry approaches - a land use study. Magnetic Resonance in Chemistry. 53:719-725. 2015
- Liu ZRochfort S. A Simple Method for Simultaneous Quantification of Total Arabinoxylans and Fructans in Wheat Flour. Journal of Agricultural and Food Chemistry. 62:8319-8324. 2014
- Maher ARochfort S. Applications of NMR in Dairy Research. Metabolites. 4:131-141. 2014
- Muradov NTaha MMiranda AFKadali KGujar ARochfort SStevenson TBall ASMouradov A. Dual application of duckweed and azolla plants for wastewater treatment and renewable fuels and petrochemicals production. Biotechnology for Biofuels. 7:1-17. 2014
- Ovenden SPigott ERochfort SBourne D. Liquid Chromatography-Mass Spectrometry and Chemometric Analysis of Ricinus communis Extracts for Cultivar Identification. Phytochemical Analysis. 25:476-484. 2014
- Vo QVTrenerry CRochfort SWhite JHughes AB. Preparation and X-ray analysis of potassium (2,3-dichlorophenyl)glucosinolate. Acta crystallographica. Section C, Structural chemistry. 70:588-594. 2014
- Liu ZRochfort S. Recent progress in polar metabolite quantification in plants using liquid chromatography-mass spectrometry. Journal of Integrative Plant Biology. 56:816-825. 2014
- Giordano ALiu ZPanter SDimech AShang YWijesinghe HFulgueras KRan YMouradov ARochfort SPatron NSpangenberg G. Reduced lignin content and altered lignin composition in the warm season forage grass Paspalum dilatatum by down-regulation of a Cinnamoyl CoA Reductase Gene. Transgenic Research. 23:503-517. 2014
- Liu ZMoate PCocks BRochfort S. Simple Liquid Chromatography-Mass Spectrometry Method for Quantification of Major Free Oligosaccharides in Bovine Milk. Journal of Agricultural and Food Chemistry. 62:11568-11574. 2014
- Vo QVTrenerry CRochfort SWadeson JLeyton CHughes AB. Synthesis and anti-inflammatory activity of indole glucosinolates. Bioorganic and Medicinal Chemistry. 22:856-864. 2014
- Rochfort SJEzernieks VMaher ADIngram BAOlsen L. Mussel metabolomics — Species discrimination and provenance determination. Food Research International. 54:1302-1312. 2013
- Craige Trenerry VAkbaridoust GPlozza TRochfort SWales WJAuldist MAjlouni S. Ultra-high-performance liquid chromatography–ion trap mass spectrometry characterisation of milk polar lipids from dairy cows fed different diets. Food Chemistry. 141:1451-1460. 2013
- Vo QVTrenerry CRochfort SHughes AB. A total synthesis of ( R , S ) S -glucoraphanin. Tetrahedron. 69:8731-8737. 2013
- Vo QVTrenerry CRochfort SWadeson JLeyton CHughes AB. Synthesis and anti-inflammatory activity of aromatic glucosinolates. Bioorganic and Medicinal Chemistry. 21:5945-5954. 2013
- Maher ADHayes BCocks BMarett LWales WJRochfort SJ. Latent Biochemical Relationships in the Blood–Milk Metabolic Axis of Dairy Cows Revealed by Statistical Integration of 1 H NMR Spectroscopic Data. Journal of Proteome Research. 12:1428-1435. 2013
- Liu ZRochfort S. A fast liquid chromatography–mass spectrometry (LC–MS) method for quantification of major polar metabolites in plants. Journal of Chromatography B: Analytical Technologies in the Biomedical and Life Sciences. 912:8-15. 2013
- Benheim DRochfort SRobertson EPotter IDPowell KS. Grape phylloxera (Daktulosphaira vitifoliae) - a review of potential detection and alternative management options. Annals of Applied Biology. 161:91-115. 2012
- Downey MMazza MSeddon TRochfort SMillikan M. Variation in Condensed Tannin Content, Composition and Polymer Length Distribution in the Skin of 36 Grape Cultivars. Current Bioactive Compounds. 8:200-217. 2012
- Pigott EJRoberts WOvenden SPBRochfort SBourne DJ. Metabolomic investigations of Ricinus communis for cultivar and provenance determination. Metabolomics. 8:634-642. 2012
- Panter SChu PGLudlow EGarrett RKalla RJahufer MZZde Lucas Arbiza ARochfort SMouradov ASmith KFSpangenberg G. Molecular breeding of transgenic white clover (Trifolium repens L.) with field resistance to Alfalfa mosaic virus through the expression of its coat protein gene. Transgenic Research. 21:619-632. 2012
- Abeynayake SWPanter SChapman RWebster TRochfort SMouradov ASpangenberg G. Biosynthesis of Proanthocyanidins in White Clover Flowers: Cross Talk within the Flavonoid Pathway. Plant Physiology. 158:666-678. 2012
- Maher ADColes CWhite JBateman JFFuller ESBurkhardt DLittle CBCake MRead RMcDonagh MBRochfort SJ. 1 H NMR Spectroscopy of Serum Reveals Unique Metabolic Fingerprints Associated with Subtypes of Surgically Induced Osteoarthritis in Sheep. Journal of Proteome Research. 11:4261-4268. 2012
- Benheim DRochfort SRobertson EPotter IPowell K. Grape phylloxera (Daktulosphaira vitifoliae) - a review of potential detection and alternative management options. Annals of Applied Biology. 161:91-115. 2012
- Feketeová LBarlow CKBenton TMRochfort SJO’Hair RAJ. The formation and fragmentation of flavonoid radical anions. International Journal of Mass Spectrometry. 301:174-183. 2011
- Rochfort SEzernieks VNeumann NPanozzo J. Pulses for Human Health: Changes in Isoflavone and Saponin Content with Preparation and Cooking. Australian Journal of Chemistry: an international journal for chemical science. 64:790-790. 2011
- Tu YRochfort SLiu ZRan YGriffith MBadenhorst PLouie GVBowman MESmith KFNoel JPMouradov ASpangenberg G. Functional Analyses of Caffeic Acid O-Methyltransferase and Cinnamoyl-CoA-Reductase Genes from Perennial Ryegrass ( Lolium perenne ). The Plant Cell. 22:3357-3373. 2010
- Rochfort SEzernieks VBastian SEPDowney MO. Sensory attributes of wine influenced by variety and berry shading discriminated by NMR metabolomics. Food Chemistry. 121:1296-1304. 2010
- Ovenden SPBGordon BRBagas CKMuir BRochfort SBourne DJ. A Study of the Metabolome of Ricinus communis for Forensic Applications. Australian Journal of Chemistry: an international journal for chemical science. 63:8-8. 2010
- Rochfort SJMoore SCraft CMartin NHVan Wagoner RMWright JLC. Further Studies on the Chemistry of the Flustra Alkaloids from the Bryozoan Flustra foliacea. Journal of Natural Products. 72:1773-1781. 2009
- Rochfort SJEzernieks VYen AL. NMR-based metabolomics using earthworms as potential indicators for soil health. Metabolomics. 5:95-107. 2009
- Elkins ABarrow RRochfort S. Carp chemical sensing and the potential of natural environmental attractants for control of carp: a review. Environmental Chemistry. 6:357-357. 2009
- Viant MRBearden DWBundy JGBurton IWCollette TWEkman DREzernieks VKarakach TKLin CYRochfort SRopp JSDTeng QTjeerdema RSWalter JAWu H. International NMR-Based Environmental Metabolomics Intercomparison Exercise. Environmental Science and Technology (Washington). 43:219-225. 2009
- Lako JTrenerry VCRochfort S. Routine analytical methods for use in South Pacific regional laboratories for determining naturally occurring antioxidants in food. International Food Research Journal. 15:313-323. 2008
- Downey MORochfort S. Simultaneous separation by reversed-phase high-performance liquid chromatography and mass spectral identification of anthocyanins and flavonols in Shiraz grape skin. Journal of Chromatography A. 1201:43-47. 2008
- Rochfort SJTrenerry VCImsic MPanozzo JJones R. Class targeted metabolomics: ESI ion trap screening methods for glucosinolates based on MSn fragmentation. Phytochemistry. 69:1671-1679. 2008
- Rochfort SParker AJDunshea FR. Plant bioactives for ruminant health and productivity. Phytochemistry. 69:299-322. 2008
- Rochfort SPanozzo J. Phytochemicals for Health, the Role of Pulses. Journal of Agricultural and Food Chemistry. 55:7981-7994. 2007
- Morrison NBearden DBundy JGCollette TCurrie FDavey MPHaigh NSHancock DJones OAHRochfort SSansone S-AŠtys DTeng QField DViant MR. Standard reporting requirements for biological samples in metabolomics experiments: environmental context. Metabolomics. 3:203-210. 2007
- CARIDI DTRENERRY VROCHFORT SDUONG SLAUGHER DJONES R. Profiling and quantifying quercetin glucosides in onion (Allium cepa L.) varieties using capillary zone electrophoresis and high performance liquid chromatography. Food Chemistry. 105:691-699. 2007
- Rochfort SCaridi DStinton MTrenerry VCJones R. The isolation and purification of glucoraphanin from broccoli seeds by solid phase extraction and preparative high performance liquid chromatography. Journal of Chromatography A. 1120:205-210. 2006
- Rochfort SJImsic MJones RTrenerry VCTomkins B. Characterization of Flavonol Conjugates in Immature Leaves of Pak Choi [ Brassica rapa L. Ssp. chinensis L. (Hanelt.)] by HPLC-DAD and LC-MS/MS. Journal of Agricultural and Food Chemistry. 54:4855-4860. 2006
- Rochfort S. Metabolomics Reviewed: A New “Omics” Platform Technology for Systems Biology and Implications for Natural Products Research. Journal of Natural Products. 68:1813-1820. 2005
- Rochfort SJTowerzey LCarroll AKing GMichael APierens GRali TRedburn JWhitmore JQuinn RJ. Latifolians A and B, Novel JNK3 Kinase Inhibitors from the Papua New Guinean Plant Gnetum l atifolium. Journal of Natural Products. 68:1080-1082. 2005
- Rochfort SFord JOvenden SWan SSGeorge SWildman HTait RMMeurer-Grimes BCox SCoates JRhodes D. A Novel Aspochalasin with HIV-1 Integrase Inhibitory Activity from Aspergillus flavipes. Journal of Antibiotics: an international journal devoted to research on bioactive microbial products. 58:279-283. 2005
- Capon RJRochfort SJOvenden SPBMetzger RP. Mycaperoxides F and G and a Related Norterpene Ketone from Southern Australian Marine Sponges, Mycale Species. Journal of Natural Products. 61:525-528. 1998
- Capon RJA Barrow RRochfort SJobling MSkene CLacey EH Gill JFriedel TWadsworth D. Marine nematocides: Tetrahydrofurans from a southern Australian brown alga, Notheia anomala. Tetrahedron. 54:2227-2242. 1998
- Capon RJRochfort SJOvenden SPB. Cyclic Peroxides and Related Norterpenes from a Southern Australian Marine Sponge, Mycale sp.. Journal of Natural Products. 60:1261-1264. 1997
- Capon RJBarrow RASkene CRochfort S. The Biomimetic Synthesis of Marine Epoxylipids : Bisepoxides to Tetrahydrofurans. Tetrahedron Letters. 38:7609-7612. 1997
- Rochfort SJGable RWCapon RJ. Mycalone: A new steroidal lactone from a southern Australian marine sponge, Mycale sp. Australian Journal of Chemistry: an international journal for chemical science. 49:715-718. 1996
- Rochfort SJMetzger RHobbs LCapon RJ. New chromenols from a Southern Australian tunicate, aplidium solidum. Australian Journal of Chemistry: an international journal for chemical science. 49:1217-1219. 1996
- Rochfort SJCapon RJ. Parguerenes revisited: New brominated diterpenes from the southern Australian marine red alga Laurencia filiformis. Australian Journal of Chemistry: an international journal for chemical science. 49:19-26. 1996
- Rochfort SJWatson RCapon RJ. Dictyosphaerin: A Novel Bicyclic Lipid from a Southern Australian Marine Green Algae, Dictyosphaeria sericea. Journal of Natural Products. 59:1154-1156. 1996
- Rochfort SJAtkin DHobbs LCapon RJ. Hippospongins A−F: New Furanoterpenes from a Southern Australian Marine Sponge Hippospongia sp.. Journal of Natural Products. 59:1024-1028. 1996
- Rochfort SJCapon RJ. A New Sesquiterpene/Phenol from the Australian Marine Brown Alga Perithalia caudata. Journal of Natural Products. 57:849-851. 1994
- Rochfort SMurray LCapon RJ. The Chemistry of Notheia anomala. III: Two New Methylene-Interrupted Trisepoxylipids. Journal of Natural Products. 55:1332-1335. 1992
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chapter
- Rochfort SJJones R. Glucosinolate Phytochemicals from Broccoli (Brassica oleracea L. var. botrytis L.) Seeds and Their Potential Health Effects. 253-261. 2011
- Trenerry VCRochfort SJ. Natural products research and metabolomics. 595-628. 2010
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conference paper
- Luke TRusso VRochfort SWales BPryce J. Mid-infrared spectroscopy of milk as a tool to predict subacute ruminal acidosis. Journal of Animal Science. 502-502. 2018
- Krill CAuer DHossain MRochfort SEdwards JPorter ISpangenberg GMann R. Isoprene identified in the volatolome of endophytic fungi as a promising phosphine alternative 2017
- Rochfort SGhamkhar KBanik BRevell C. Metabolomics for Methane Mitigation: A Case Study in Biserrula (Biserrula pelecinus L.). In Breeding in a World of Scarcity. Breeding in a World of Scarcity Proceedings of the 2015 Meeting of the Section “Forage Crops and Amenity Grasses” of Eucarpia. 271-275. 2016
- Benheim DRochfort SKorosi GAPowell KSRobertson EPotter ID. NUCLEAR MAGNETIC RESONANCE METABOLIC PROFILING OF LEAVES FROM VITIS VINIFERA INFESTED WITH ROOT-FEEDING GRAPE PHYLLOXERA (DAKTULOSPHAIRA VITIFOLIAE FITCH) UNDER FIELD CONDITIONS. Acta Horticulturae. 59-66. 2014
- Benheim DRochfort SEzernieks VKorosi GAPowell KSRobertson EPotter ID. Early Detection of Grape Phylloxera (Daktulosphaira vitifoliae Fitch) Infestation through Identification of Chemical Biomarkers. Acta Horticulturae. 17-24. 2011
- Abeynayake SPanter SRochfort SMouradov ASpangenberg G. Cross talk within the flavonoid pathway in white clover (Trifolium repens L.)[Abstract]. 208-208. 2010
- Abeynayake SPanter SRochfort SDrayton MHand MCogan NForster JMouradov ASpangenberg G. Spatio-temporal profile of proanthocyanidin biosynthesis in white clover.[Abstract]. 207-207. 2010