subject area of

• 2-Methoxyestradiol Is an Estrogen Receptor Agonist That Supports Tumor Growth in Murine Xenograft Models of Breast Cancer  Academic Article
• A Casparian strip domain-like gene, CASPL, negatively alters growth and cold tolerance  Academic Article
• A Compendium of Potential Biomarkers of Pancreatic Cancer  Academic Article
• A Customized Gene Expression Microarray Reveals That the Brittle Stem Phenotype fs2 of Barley Is Attributable to a Retroelement in the HvCesA4 Cellulose Synthase Gene  Academic Article
• A Dictyostelium SH2 adaptor protein required for correct DIF-1 signaling and pattern formation  Academic Article
• A Functional Yeast Survival Screen of Tumor-Derived cDNA Libraries Designed to Identify Anti-Apoptotic Mammalian Oncogenes  Academic Article
• A Membrane-Bound NAC Transcription Factor, ANAC017, Mediates Mitochondrial Retrograde Signaling in Arabidopsis  Academic Article
• A MicroRNA Guide for Clinicians and Basic Scientists: Background and Experimental Techniques  Academic Article
• A Portrait of the Transcriptome of the Neglected Trematode, Fasciola gigantica—Biological and Biotechnological Implications  Academic Article
• A Scalable Permutation Approach Reveals Replication and Preservation Patterns of Network Modules in Large Datasets  Academic Article
• A Serial Analysis of Gene Expression Profile of the Alzheimer’s Disease Tg2576 Mouse Model  Academic Article
• A Systematic Strategy for the Discovery of Candidate Genes Responsible for Phenotypic Variation  Academic Article
• A combined proteomic and transcriptomic analysis of slime secreted by the southern bottletail squid, Sepiadarium austrinum (Cephalopoda)  Academic Article
• A comparative system-level analysis of the neurodegenerative diseases  Academic Article
• A cytochrome P450, OsDSS1, is involved in growth and drought stress responses in rice (Oryza sativa L.)  Academic Article
• A gene expression profile that defines colon cell maturation in vitro  Academic Article
• A genome-wide transcriptome map of pistachio (Pistacia vera L.) provides novel insights into salinity-related genes and marker discovery  Academic Article
• A molecular threshold for effector CD8(+) T cell differentiation controlled by transcription factors Blimp-1 and T-bet  Academic Article
• A new normalization for Nanostring nCounter gene expression data  Academic Article
• A novel mouse model of atherosclerotic plaque Instability for drug testing and mechanistic/therapeutic discoveries using gene and microRNA expression profiling  Academic Article
• A novel role of the soybean clock gene LUX ARRHYTHMO in male reproductive development  Academic Article
• A putative kinase-related protein (PKRP) from Plasmodium berghei mediates infection in the midgut and salivary glands of the mosquito  Academic Article
• A systematic strategy for large-scale analysis of genotype–phenotype correlations: identification of candidate genes involved in African trypanosomiasis  Academic Article
• A transcription factor contributes to pathogenesis and virulence in Streptococcus pneumoniae  Academic Article
• Aberrant luminal progenitors as the candidate target population for basal tumor development in BRCA1 mutation carriers  Academic Article
• Accelerated aging-related transcriptome changes in the female prefrontal cortex  Academic Article
• Altered Dynamics of Intestinal Cell Maturation in Apc1638N/+ Mice  Academic Article
• Altered expression of histone and synaptic plasticity associated genes in the hippocampus of streptozotocin-induced diabetic mice  Academic Article
• Alternative transcripts of presenilin-1 associated with frontotemporal dementia  Academic Article
• An RNA-Seq Transcriptome Analysis of Histone Modifiers and RNA Silencing Genes in Soybean during Floral Initiation Process  Academic Article
• An effective non-parametric method for globally clustering genes from expression profiles  Academic Article
• An optimised direct lysis method for gene expression studies on low cell numbers  Academic Article
• Analysis of Ras-induced oncogenic transformation of NIH-3T3 cells using differential-display 2-DE proteomics  Academic Article
• Analysis of mitochondrial gene expression  Chapter
• Analysis of the Rice Mitochondrial Carrier Family Reveals Anaerobic Accumulation of a Basic Amino Acid Carrier Involved in Arginine Metabolism during Seed Germination  Academic Article
• Anode Biofilm Transcriptomics Reveals Outer Surface Components Essential for High Density Current Production in Geobacter sulfurreducens Fuel Cells  Academic Article
• Approaches to functional genomics in filamentous fungi  Academic Article
• Aprataxin Tumor Levels Predict Response of Colorectal Cancer Patients to Irinotecan-based Treatment  Academic Article
• Assessing technical performance in differential gene expression experiments with external spike-in RNA control ratio mixtures  Academic Article
• AtWRKY40 and AtWRKY63 Modulate the Expression of Stress-Responsive Nuclear Genes Encoding Mitochondrial and Chloroplast Proteins  Academic Article
• BASC: an integrated bioinformatics system for Brassica research  Academic Article
• BTB-Zinc Finger Oncogenes Are Required for Ras and Notch-Driven Tumorigenesis in Drosophila  Academic Article
• BeadArray Expression Analysis Using Bioconductor  Academic Article
• Biomarkers of 5-fu response in colon cancer [Brief Commentary]  Comment
• Blimp-1 controls plasma cell function through the regulation of immunoglobulin secretion and the unfolded protein response  Academic Article
• Bmf: A Proapoptotic BH3-Only Protein Regulated by Interaction with the Myosin V Actin Motor Complex, Activated by Anoikis  Academic Article
• Brief report: Stem cell media culture of melanoma results in the induction of a nonrepresentative neural expression profile  Academic Article
• Cancer-associated fibroblast-secreted CXCL16 attracts monocytes to promote stroma activation in triple-negative breast cancers  Academic Article
• Cardiogenic genes expressed in cardiac fibroblasts contribute to heart development and repair  Academic Article
• Cellular Redox Activity of Coenzyme Q 10 : Effect of CoQ 10 Supplementation on Human Skeletal Muscle  Academic Article
• Cerebral transcriptome analysis reveals age-dependent progression of neuroinflammation in P301S mutant tau transgenic male mice  Academic Article
• Change in proteoglycan metabolism is a characteristic of human patellar tendinopathy  Academic Article
• Changes in Lolium perenne transcriptome during cold acclimation in two genotypes adapted to different climatic conditions  Academic Article
• Characterization and deep sequencing analysis of exosomal and non-exosomal miRNA in human urine  Academic Article
• Characterization of Mitochondrial Alternative NAD(P)H Dehydrogenases in Arabidopsis: Intraorganelle Location and Expression  Academic Article
• Characterization of TCTP, the Translationally Controlled Tumor Protein, from Arabidopsis thaliana  Academic Article
• Chronic contractile dysfunction without hypertrophy does not provoke a compensatory transcriptional response in mouse hearts  Academic Article
• Clinically relevant inflammatory breast cancer patient-derived xenograft–derived ex vivo model for evaluation of tumor-specific therapies  Academic Article
• Co-expression of a cyclizing asparaginyl endopeptidase enables efficient production of cyclic peptides in planta  Academic Article
• Colorectal cancer cell line proteomes are representative of primary tumors and predict drug sensitivity  Academic Article
• Combined gene expression and proteomic analysis of EGF induced apoptosis in A431 cells suggests multiple pathways trigger apoptosis  Academic Article
• Common and distinct organ and stress responsive transcriptomic patterns in Oryza sativa and Arabidopsis thaliana  Academic Article
• Comparative Analysis of Syntenic Genes in Grass Genomes Reveals Accelerated Rates of Gene Structure and Coding Sequence Evolution in Polyploid Wheat  Academic Article
• Comparative analysis between plant species of transcriptional and metabolic responses to hypoxia  Academic Article
• Comparison of hematopoietic cancer stem cells with normal stem cells leads to discovery of novel differentially expressed SSRs  Academic Article
• Comparison of transcriptome profiles by Fusarium oxysporum inoculation between Fusarium yellows resistant and susceptible lines in Brassica rapa L.  Academic Article
• Complementarity and redundancy of IL-22-producing innate lymphoid cells  Academic Article
• Complexity of Inflammatory Responses in Endothelial Cells and Vascular Smooth Muscle Cells Determined by Microarray Analysis  Conference Paper
• Conserved and Novel Functions forArabidopsis thalianaMIA40 in Assembly of Proteins in Mitochondria and Peroxisomes  Academic Article
• Construction of developmental lineage relationships in the mouse mammary gland by single-cell RNA profiling  Academic Article
• Correlating gene and protein expression data using Correlated Factor Analysis  Academic Article
• Customizing chemotherapy for colon cancer: the potential of gene expression profiling  Academic Article
• Cytokinin response factor 6 represses cytokinin-associated genes during oxidative stress  Academic Article
• DECENT: differential expression with capture efficiency adjustmeNT for single-cell RNA-seq data  Academic Article
• DNA Methylation Profiling of Breast Cancer Cell Lines along the Epithelial Mesenchymal Spectrum—Implications for the Choice of Circulating Tumour DNA Methylation Markers  Academic Article
• DNA methylation profiling of phyllodes and fibroadenoma tumours of the breast  Academic Article
• De Novo Characterisation of the Greenlip Abalone Transcriptome (Haliotis laevigata) with a Focus on the Heat Shock Protein 70 (HSP70) Family  Academic Article
• De novo assembly and characterisation of the field pea transcriptome using RNA-Seq  Academic Article
• De novo genome assembly and annotation of Australia's largest freshwater fish, the Murray cod (Maccullochella peelii), from Illumina and Nanopore sequencing read  Academic Article
• De novo transcriptome assembly and analysis of differentially expressed genes of two barley genotypes reveal root-zone-specific responses to salt exposure  Academic Article
• De novo transcriptome assembly and comparative analysis of differentially expressed genes in Prunus dulcis Mill. in response to freezing stress  Academic Article
• Decreasing Electron Flux through the Cytochrome and/or Alternative Respiratory Pathways Triggers Common and Distinct Cellular Responses Dependent on Growth Conditions  Academic Article
• Defining Core Metabolic and Transcriptomic Responses to Oxygen Availability in Rice Embryos and Young Seedlings  Academic Article
• Defining reference genes in Oryza sativa using organ, development, biotic and abiotic transcriptome datasets  Academic Article
• Defining the purity of exosomes required for diagnostic profiling of small RNA suitable for biomarker discovery  Academic Article
• Detection of genes with moderate effects on disease resistance using ovine mhc and resistance to nematodes as an example  Conference Paper
• Determining epithelial contribution to in vivo mesenchymal tumour expression signature using species-specific microarray profiling analysis of xenografts  Academic Article
• Development and application of a modified dynamic time warping algorithm (DTW-S) to analyses of primate brain expression time series  Academic Article
• Development of a porcine skeletal muscle cDNA microarray: analysis of differential transcript expression in phenotypically distinct muscles  Academic Article
• Dietary Components Modify Gene Expression: Implications for Carcinogenesis  Conference Paper
• Dietary fat quality impacts genome-wide DNA methylation patterns in a cross-sectional study of Greek preadolescents  Academic Article
• Differential Expression of the CXCR3 Ligands in Chronic Hepatitis C Virus (HCV) Infection and Their Modulation by HCV In Vitro  Academic Article
• Differential Response of Gray Poplar Leaves and Roots Underpins Stress Adaptation during Hypoxia  Academic Article
• Differential expression of toll-like receptor mRNA in selected tissues of goat (Capra hircus)  Academic Article
• Differential intron retention in Jumonji chromatin modifier genes is implicated in reptile temperature-dependent sex determination  Academic Article
• Discovery and analysis of consistent active sub-networks in cancers  Conference Paper
• Discovery and characterization of an epithelial-specific galectin in the endometrium that forms crystals in the trophectoderm  Academic Article
• Dissecting HDAC3-mediated tumor progression  Academic Article
• Dissecting the metabolic role of mitochondria during developmental leaf senescence  Academic Article
• Distinct nuclear receptor expression in stroma adjacent to breast tumors  Academic Article
• E2f4 regulates fetal erythropoiesis through the promotion of cellular proliferation  Academic Article
• Effector Regulatory T Cell Differentiation and Immune Homeostasis Depend on the Transcription Factor Myb  Academic Article
• Efficient backbone cyclization of linear peptides by a recombinant asparaginyl endopeptidase  Academic Article
• Elementary: Breast cancer culprits leave their signatures on the double helix  Academic Article
• Empirical array quality weights in the analysis of microarray data  Academic Article
• Enhanced technique to measure proteins in single segments of human skeletal muscle fibers: fiber-type dependence of AMPK-α1 and -β1  Academic Article
• Estimating the proportion of microarray probes expressed in an RNA sample  Academic Article
• Experimental Validation of Ankrd17 and Anapc10, Two Novel Meiotic Genes Predicted by Computational Models in Mice1  Academic Article
• Experimental approaches to studying the nature and impact of splicing variation in zebrafish  Chapter
• Exploring multicollinearity using a random matrix theory approach  Academic Article
• Expression analyses of salinity stress- associated ESTs in Aeluropus littoralis  Academic Article
• Expression of zebrafish cxcl8 (interleukin-8) and its receptors during development and in response to immune stimulation  Academic Article
• Expression profiling of a hemopoietic cell survival transcriptome implicates osteopontin as a functional prognostic factor in AML  Academic Article
• Expression profiling of metabolic genes in response to methyl jasmonate reveals regulation of genes of primary and secondary sulfur-related pathways in Arabidopsis thaliana  Academic Article
• Extracellular Remodelling During Oncogenic Ras-Induced Epithelial-Mesenchymal Transition Facilitates MDCK Cell Migration  Academic Article
• Fatty acids induce a pro-inflammatory gene expression profile in Huh-7 cells that attenuates the anti-HCV action of interferon  Academic Article
• Fine-scale comparative genetic and physical mapping supports map-based cloning strategies for the self-incompatibility loci of perennial ryegrass (Lolium perenne L.)  Academic Article
• Full-Length Transcriptome Analysis of the Genes Involved in Tocopherol Biosynthesis in Torreya grandis  Academic Article
• FunRich: An open access standalone functional enrichment and interaction network analysis tool  Academic Article
• Functional and genomic characterisation of a xenograft model system for the study of metastasis in triple-negative breast cancer  Academic Article
• Functional and molecular characterisation of EO771.LMB tumours, a new C57BL/6-mouse-derived model of spontaneously metastatic mammary cancer  Academic Article
• Functional characterization of AP3, SOC1 and WUS homologues from citrus (Citrus sinensis)  Academic Article
• Galectin-11 induction in the gastrointestinal tract of cattle following nematode and protozoan infections  Academic Article
• Geminin regulates neuronal differentiation by antagonizing Brg1 activity  Academic Article
• Gene Expression Profiling-Based Prediction of Response of Colon Carcinoma Cells to 5-Fluorouracil and Camptothecin  Academic Article
• Gene Ontology-Based Analysis of Zebrafish Omics Data Using the Web Tool Comparative Gene Ontology  Other Publication
• Gene expression in diplosporous and sexual Eragrostis curvula genotypes with differing ploidy levels  Academic Article
• Gene expression profiling of intestinal epithelial cell maturation along the crypt-villus axis  Academic Article
• Gene expression profiling of primary and metastatic colon cancers identifies a reduced proliferative rate in metastatic tumors  Academic Article
• Genes for Two Mitochondrial Ribosomal Proteins in Flowering Plants Are Derived from Their Chloroplast or Cytosolic Counterparts  Academic Article
• Genetic Interference With Peroxisome Proliferator-Activated Receptor y  in Smooth Muscle Enhances Myogenic Tone in the Cerebrovasculature via A Rho Kinase-Dependent Mechanism  Academic Article
• Genetic analysis of ETS genes in C. elegans  Academic Article
• Genetic and expression analysis of cattle identifies candidate genes in pathways responding to Trypanosoma congolense infection  Academic Article
• Genetic association study of exfoliation syndrome identifies a protective rare variant at LOXL1 and five new susceptibility loci  Academic Article
• Genetic reprogramming in pathways of colonic cell maturation induced by short chain fatty acids: Comparison with trichostatin A, sulindac, and curcumin and implications for chemoprevention of colon cancer  Academic Article
• Genome-Wide Analysis of mRNA Decay Rates and Their Determinants in Arabidopsis thaliana  Academic Article
• Genome-wide analysis of ivermectin response by Onchocerca volvulus reveals that genetic drift and soft selective sweeps contribute to loss of drug sensitivity  Academic Article
• Genome-wide transcription responses to synchrotron microbeam radiotherapy  Academic Article
• Genotyping-by-sequencing through transcriptomics: implementation in a range of crop species with varying reproductive habits and ploidy levels  Academic Article
• Global transcriptome analysis of AtPAP2 - overexpressing Arabidopsisthaliana with elevated ATP  Academic Article
• Glucocorticoid resistance of migration and gene expression in a daughter MDA-MB-231 breast tumour cell line selected for high metastatic potential  Academic Article
• Grouping miRNAs of similar functions via weighted information content of gene ontology  Academic Article
• HER3 and downstream pathways are involved in colonization of brain metastases from breast cancer  Academic Article
• HIV-1 infection of human macrophages directly induces viperin which inhibits viral production  Academic Article
• HOXB7, a Homeodomain Protein, Is Overexpressed in Breast Cancer and Confers Epithelial-Mesenchymal Transition  Academic Article
• Helicobacter pylori VacA suppresses Lactobacillus acidophilus-induced interferon beta signaling in macrophages via alterations in the endocytic pathway  Academic Article
• High density array screening to identify the genetic requirements for transition metal tolerance in Saccharomyces cerevisiae  Academic Article
• Human Proteinpedia enables sharing of human protein data  Academic Article
• Identification and characterisation of hypomethylated DNA loci controlling quantitative resistance in Arabidopsis  Academic Article
• Identification and characterisation of microRNAs and their target genes in phosphate-starved Nicotiana benthamiana by small RNA deep sequencing and 5’RACE analysis  Academic Article
• Identification of a novel iron regulated basic helix-loop-helix protein involved in Fe homeostasis in Oryza sativa  Academic Article
• Identification of candidate flowering and sex genes in white Guinea yam (D. Rotundata Poir.) by SuperSAGE transcriptome profiling  Academic Article
• Identification of cis-regulatory elements specific for different types of reactive oxygen species in Arabidopsis thaliana  Academic Article
• Identification of conserved core xylem gene sets: conifer cDNA microarray development, transcript profiling and computational analyses  Academic Article
• Identification of plant defence genes in canola usingArabidopsiscDNA microarrays  Academic Article
• Identification of well-differentiated gene expressions between Han Chinese and Japanese using genome-wide microarray data analysis  Academic Article
• Identifying stable reference genes for qRT-PCR normalisation in gene expression studies of narrow-leafed lupin (Lupinus angustifolius L.)  Academic Article
• Illumina WG-6 BeadChip strips should be normalized separately  Academic Article
• Importin α mRNAs have distinct expression profiles during spermatogenesis  Academic Article
• In-Depth Temporal Transcriptome Profiling Reveals a Crucial Developmental Switch with Roles for RNA Processing and Organelle Metabolism That Are Essential for Germination in Arabidopsis  Academic Article
• Integrated mutation, copy number and expression profiling in resectable non-small cell lung cancer  Academic Article
• Integration of machine learning and meta-analysis identifies the transcriptomic bio-signature of mastitis disease in cattle  Academic Article
• Integration of microRNA signatures of distinct mammary epithelial cell types with their gene expression and epigenetic portraits  Academic Article
• Integrative meta-analysis of transcriptomic responses to abiotic stress in cotton  Academic Article
• Interaction of Genetic and Dietary Factors in Mouse Intestinal Tumorigenesis  Conference Paper
• Interferon regulatory Factor 6 promotes Keratinocyte differentiation in response to Porphyromonas gingivalis  Academic Article
• Interleukin 33 Signaling Restrains Sporadic Colon Cancer in an Interferon-γ–Dependent Manner  Academic Article
• Is the future of personalized therapy in triple-negative breast cancer based on molecular subtype?  Academic Article
• Isolation and Characterization of a Novel Inducible Mammalian Galectin  Academic Article
• Isolation of tissues and preservation of RNA from intact, germinated barley grain  Academic Article
• Isolation, X location and activity of the marsupial homologue of SLC16A2, an XIST-flanking gene in eutherian mammals  Academic Article
• Joint estimation of isoform expression and isoform-specific read distribution using multisample RNA-Seq data  Academic Article
• KNAT7 Positively Regulates Xylan Biosynthesis by Directly Activating IRX9 Expression in Arabidopsis  Academic Article
• LPS hypersensitivity of gp130 mutant mice is independent of elevated haemopoietic TLR4 signaling  Academic Article
• Laser capture microdissection and cDNA array analysis of endometrium identify CCL16 and CCL21 as epithelial-derived inflammatory mediators associated with endometriosis  Academic Article
• Liquid-based free-flow electrophoresis–reversed-phase HPLC: a proteomic tool  Academic Article
• Lung morphogenesis is orchestrated through Grainyhead-like 2 (Grhl2) transcriptional programs  Academic Article
• Mapping Metabolic and Transcript Temporal Switches during Germination in Rice Highlights Specific Transcription Factors and the Role of RNA Instability in the Germination Process  Academic Article
• Mapping the regulatory sequences controlling 93 breast cancer-associated miRNA genes leads to the identification of two functional promoters of the Hsa-mir-200b cluster, methylation of which is associated with metastasis or hormone receptor status in advanced breast cancer  Academic Article
• Meta-Analysis of Microarray Studies Reveals a Novel Hematopoietic Progenitor Cell Signature and Demonstrates Feasibility of Inter-Platform Data Integration  Academic Article
• Meta-analysis of genome-wide association studies identifies novel loci that influence cupping and the glaucomatous process  Academic Article
• Metabonomic, transcriptomic, and genomic variation of a population cohort  Academic Article
• MicroRNA‐based regulatory circuit involved in sperm infertility  Academic Article
• Microarray analysis in the clinical management of cancer  Academic Article
• Microparticles: major transport vehicles for distinct microRNAs in circulation  Academic Article
• Microtoming coupled to microarray analysis to evaluate the spatial metabolic status of Geobacter sulfurreducens biofilms  Academic Article
• Minor class splicing shapes the zebrafish transcriptome during development  Academic Article
• Modified least-variant set normalization for miRNA microarray  Academic Article
• Molecular Definition of the Ascorbate-Glutathione Cycle inArabidopsisMitochondria Reveals Dual Targeting of Antioxidant Defenses in Plants  Academic Article
• Molecular characterization of Brassica napus stress related transcription factors, BnMYB44 and BnVIP1, selected based on comparative analysis of Arabidopsis thaliana and Eutrema salsugineum transcriptomes  Academic Article
• Molecular mechanisms of action and prediction of response to oxaliplatin in colorectal cancer cells  Academic Article
• Mouse ghrelin‐ O ‐acyltransferase (GOAT) plays a critical role in bile acid reabsorption  Academic Article
• NDRG2, a novel regulator of myoblast proliferation, is regulated by anabolic and catabolic factors  Academic Article
• Nedd4-WW Domain-Binding Protein 5 (Ndfip1) Is Associated with Neuronal Survival after Acute Cortical Brain Injury  Academic Article
• Neoadjuvant neratinib promotes ferroptosis and inhibits brain metastasis in a novel syngeneic model of spontaneous HER2(+ve) breast cancer metastasis  Academic Article
• Network analysis of inflammatory responses to sepsis by neutrophils and peripheral blood mononuclear cells  Academic Article
• No contribution of IP₃-R(2) to disease phenotype in models of dilated cardiomyopathy or pressure overload hypertrophy  Academic Article
• Notch Signaling Regulates Mammary Stem Cell Function and Luminal Cell-Fate Commitment  Academic Article
• Novel Loci for Metabolic Networks and Multi-Tissue Expression Studies Reveal Genes for Atherosclerosis  Academic Article
• Novel evidence for complement system activation in chick myopia and hyperopia models: a meta-analysis of transcriptome datasets  Academic Article
• Olig2-Induced Neural Stem Cell Differentiation Involves Downregulation of Wnt Signaling and Induction of Dickkopf-1 Expression  Academic Article
• Oncogenic Ki-Ras Inhibits the Expression of Interferon-responsive Genes through Inhibition of STAT1 and STAT2 Expression  Academic Article
• Ontogenic expression profiles of thyroid-specific genes in embryonic and hatching chicks  Academic Article
• Optimizing the noise versus bias trade-off for Illumina whole genome expression BeadChips  Academic Article
• Organ-specific phosphorus-allocation patterns and transcript profiles linked to phosphorus efficiency in two contrasting wheat genotypes  Academic Article
• Origin and evolution of candidate mental retardation genes on the human X chromosome (MRX)  Academic Article
• PI3K(p110α) Protects Against Myocardial Infarction-Induced Heart Failure  Academic Article
• PLAG1 deficiency impairs spermatogenesis and sperm motility in mice  Academic Article
• PTEN gene expression and mutations in the PIK3CA gene as predictors of clinical benefit to anti-epidermal growth factor receptor antibody therapy in patients with KRAS wild-type metastatic colorectal cancer  Academic Article
• Parathyroid Hormone-Related Protein Protects against Mammary Tumor Emergence and Is Associated with Monocyte Infiltration in Ductal Carcinoma In situ  Academic Article
• Pattern of Deposition of Cell Wall Polysaccharides and Transcript Abundance of Related Cell Wall Synthesis Genes during Differentiation in Barley Endosperm  Academic Article
• Phenotype-assisted transcriptome analysis identifies FOXM1 downstream from Ras–MKK3–p38 to regulate in vitro cellular invasion  Academic Article
• Physiological and Transcriptome Analysis of Iron and Phosphorus Interaction in Rice Seedlings  Academic Article
• Physiological and transcriptome responses to combinations of elevated CO2 and magnesium in Arabidopsis thaliana  Academic Article
• Plant Mitochondrial Transcriptomics by Quantitative RT-PCR  Academic Article
• Plant cell wall biosynthesis: genetic, biochemical and functional genomics approaches to the identification of key genes  Academic Article
• Plant-specific preprotein and amino acid transporter proteins are required for tRNA import into mitochondria  Academic Article
• Plasmacytoid dendritic cell heterogeneity is defined by CXCL10 expression following TLR7 stimulation  Academic Article
• Predicting Clinical Outcome through Molecular Profiling in Stage III Melanoma  Academic Article
• Predicting the presence of oral squamous cell carcinoma using commonly dysregulated MicroRNA in oral swirls  Academic Article
• Prediction of potential cancer-risk regions based on transcriptome data: Towards a comprehensive view  Academic Article
• Predictive Mesoscale Network Model of Cell Fate Decisions during C. elegans Embryogenesis  Academic Article
• Proteomic and Metabolic Profiling of Rice Suspension Culture Cells as a Model to Study Abscisic Acid Signaling Response Pathways in Plants  Academic Article
• Proteomic profiling of secretome and adherent plasma membranes from distinct mammary epithelial cell subpopulations  Academic Article
• Proteomics informed by transcriptomics for characterising differential cellular susceptibility to Nelson Bay orthoreovirus infection  Academic Article
• Quantitative analysis of in situ hybridization histochemistry  Book
• Quantitative rather than qualitative differences in gene expression predominate in intestinal cell maturation along distinct cell lineages  Academic Article
• Recruitment of old genes to new functions: evidences obtained by comparing the orthologues of human XLMR genes in mouse and chicken  Academic Article
• Reduction in sphingosine kinase 1 influences the susceptibility to dengue virus infection by altering antiviral responses  Academic Article
• Requirement for Lyl1 in a model of Lmo2-driven early T-cell precursor ALL  Academic Article
• Reversal of Vascular Macrophage Accumulation and Hypertension by a CCR2 Antagonist in Deoxycorticosterone/Salt-Treated Mice  Academic Article
• Rice SPX-Major Facility Superfamily3, a Vacuolar Phosphate Efflux Transporter, Is Involved in Maintaining Phosphate Homeostasis in Rice  Academic Article
• Rice suspension cultured cells are evaluated as a model system to study salt responsive networks in plants using a combined proteomic and metabolomic profiling approach  Academic Article
• Riding the Spermatogenic Wave: Profiling Gene Expression Within Neonatal Germ and Sertoli Cells During a Synchronized Initial Wave of Spermatogenesis in Mice  Academic Article
• Root cell-specific regulators of phosphate-dependent growth  Academic Article
• SCA-1 Labels a Subset of Estrogen-Responsive Bipotential Repopulating Cells within the CD24⁺ CD49f^hi Mammary Stem Cell-Enriched Compartment  Academic Article
• SLTAB2 is the paramutated SULFUREA locus in tomato  Academic Article
• SMAD3 dosage determines androgen responsiveness and sets the pace of postnatal testis development  Academic Article
• SOX9 has both conserved and novel roles in marsupial sexual differentiation  Academic Article
• ST7-mediated suppression of tumorigenicity of prostate cancer cells is characterized by remodeling of the extracellular matrix  Academic Article
• STC1 expression is associated with tumor growth and metastasis in breast cancer  Academic Article
• Sequence-tagged microsatellite profiling (STMP): a rapid technique for developing SSR markers  Academic Article
• SerpinB2 regulates stromal remodelling and local invasion in pancreatic cancer  Academic Article
• Sex-specific transcriptional and proteomic signatures in schizophrenia  Academic Article
• Short Chain Fatty Acids and Colon Cancer  Conference Paper
• Silencing of Irf7 pathways in breast cancer cells promotes bone metastasis through immune escape  Academic Article
• Single-Cell Transcriptional Profiling Reveals Cellular Diversity and Intercommunication in the Mouse Heart  Academic Article
• Small RNA deep sequencing discriminates subsets of extracellular vesicles released by melanoma cells - Evidence of unique microRNA cargos  Academic Article
• Snail is a repressor of RKIP transcription in metastatic prostate cancer cells  Academic Article
• Spatial and Temporal Expression Profiles of Urocortin 3 mRNA in the Brain of the Chicken (Gallus gallus)  Academic Article
• Spatio-Temporal Transcript Profiling of Rice Roots and Shoots in Response to Phosphate Starvation and Recovery  Academic Article
• Streptococcal collagen-like protein A and general stress protein 24 are immunomodulating virulence factors of group A Streptococcus  Academic Article
• Stress-induced co-expression of alternative respiratory chain components in Arabidopsis thaliana  Academic Article
• Successful In Vitro Expansion and Differentiation of Cord Blood Derived CD34+ Cells into Early Endothelial Progenitor Cells Reveals Highly Differential Gene Expression  Academic Article
• Sulphur dioxide evokes a large scale reprogramming of the grape berry transcriptome associated with oxidative signalling and biotic defence responses  Academic Article
• Systems analysis identifies miR-29b regulation of invasiveness in melanoma  Academic Article
• Targeted mining of drought stress-responsive genes from EST resources in Cleistogenes songorica  Academic Article
• Tau and aging – Dialling up inflammation in the brain  Comment
• The Ancient Source of a Distinct Gene Family Encoding Proteins Featuring RING and C3H Zinc-Finger Motifs with Abundant Expression in Developing Brain and Nervous System  Academic Article
• The Genetics and Transcriptional Profiles of the Cellulose Synthase-Like HvCslF Gene Family in Barley  Academic Article
• The IL-6–gp130–STAT3 pathway in hepatocytes triggers liver protection in T cell–mediated liver injury  Academic Article
• The Intestinal Epithelial Cell Differentiation Marker Intestinal Alkaline Phosphatase (ALPi) Is Selectively Induced by Histone Deacetylase Inhibitors (HDACi) in Colon Cancer Cells in a Kruppel-like Factor 5 (KLF5)-dependent Manner  Academic Article
• The MYB80 Transcription Factor Is Required for Pollen Development and the Regulation of Tapetal Programmed Cell Death in Arabidopsis thaliana  Academic Article
• The Membrane-Bound NAC Transcription Factor ANAC013 Functions in Mitochondrial Retrograde Regulation of the Oxidative Stress Response in Arabidopsis  Academic Article
• The Mycoplasma hyorhinis p37 Protein Rapidly Induces Genes in Fibroblasts Associated with Inflammation and Cancer  Academic Article
• The Phosphate Fast-Responsive Genes PECP1 and PPsPase1 Affect Phosphocholine and Phosphoethanolamine Content  Academic Article
• The Tasmanian Devil Transcriptome Reveals Schwann Cell Origins of a Clonally Transmissible Cancer  Academic Article
• The Zebrafish Equivalent of Alzheimer’s Disease-Associated PRESENILIN Isoform PS2V Regulates Inflammatory and Other Responses to Hypoxic Stress  Academic Article
• The carcinogenome project: in vitro gene expression profiling of chemical perturbations to predict long-term carcinogenicity  Academic Article
• The cross-pathway control system regulates production of the secondary metabolite toxin, sirodesmin PL, in the ascomycete, Leptosphaeria maculans  Academic Article
• The pluripotency homeobox geneNANOG is expressed in human germ cell tumors  Academic Article
• The prognostic impact of Consensus Molecular Subtypes (CMS) and its predictive effects for bevacizumab benefit in metastatic colorectal cancer: molecular analysis of the AGITG MAX clinical trial.  Academic Article
• The role of oxytocin receptor gene (OXTR) DNA methylation (DNAm) in human social and emotional functioning: A systematic narrative review  Academic Article
• The transcription cofactor c-JUN mediates phenotype switching and BRAF inhibitor resistance in melanoma  Academic Article
• The transcription factor MYB29 Is a regulator of ALTERNATIVE OXIDASE1a  Academic Article
• The transcription factors Blimp-1 and IRF4 jointly control the differentiation and function of effector regulatory T cells  Academic Article
• The transcription factors IRF8 and PU.1 negatively regulate plasma cell differentiation  Academic Article
• The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line  Academic Article
• Tissue-specific transcriptional biomarkers in medicinal plants: Application of large-scale meta-analysis and computational systems biology  Academic Article
• Toward deciphering the genome-wide transcriptional responses of rice to phosphate starvation and recovery  Academic Article
• Tpl2 kinase regulates T cell interferon-γ production and host resistance to Toxoplasma gondii  Academic Article
• Transcript profiling of pattern recognition receptors in a semi domesticated breed of buffalo, Toda, of India  Academic Article
• Transcriptional analysis in microbial fuel cells: common pitfalls in global gene expression studies of microbial biofilms  Academic Article
• Transcriptional analysis of early lineage commitment in human embryonic stem cells  Academic Article
• Transcriptional profiling of mouse B cell terminal differentiation defines a signature for antibody-secreting plasma cells  Academic Article
• Transcriptome analyses of mouse and human mammary cell subpopulations reveal multiple conserved genes and pathways  Academic Article
• Transcriptome analysis of Neotyphodium and Epichloë grass endophytes  Academic Article
• Transcriptome profiling of bacterial responses to root exudates identifies genes involved in microbe-plant interactions  Academic Article
• Transcriptome sequencing of field pea and faba bean for discovery and validation of SSR genetic markers  Academic Article
• Transcriptome sequencing of lentil based on second-generation technology permits large-scale unigene assembly and SSR marker discovery  Academic Article
• Transcriptome variation in response to gastrointestinal nematode infection in goats  Academic Article
• Transcriptomic Coordination in the Human Metabolic Network Reveals Links between n-3 Fat Intake, Adipose Tissue Gene Expression and Metabolic Health  Academic Article
• Transcriptomic analysis of wheat near-isogenic lines identifies PM19-A1 and A2 as candidates for a major dormancy QTL  Academic Article
• Transcriptomic profiling of astrocytes treated with the Rho kinase inhibitor Fasudil reveals cytoskeletal and pro-survival responses  Academic Article
• Transcriptomics technologies  Academic Article
• Tri-mean-based statistical differential gene expression detection  Academic Article
• Unique ability of pandemic influenza to downregulate the genes involved in neuronal disorders  Academic Article
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