subject area of

• 3′ RACE Walking along a Large cDNA Employing Tiered Suppression PCR  Academic Article
• A Note on the Derivation of Epidemic Final Sizes  Academic Article
• A Similarity Searching System for Biological Phenotype images Using Deep Convolutional Encoder-decoder Architecture  Academic Article
• A comprehensive mapping of the structure and gene organisation in the sheep MHC class I region  Academic Article
• A comprehensive study of RNA secondary structure alignment algorithms  Academic Article
• A data-driven network model for the emerging COVID-19 epidemics in Wuhan, Toronto and Italy  Academic Article
• A first-generation integrated tammar wallaby map and its use in creating a tammar wallaby first-generation virtual genome map  Academic Article
• A functional genomics catalogue of activated transcription factors during pathogenesis of pneumococcal disease  Academic Article
• A genome-wide transcriptome map of pistachio (Pistacia vera L.) provides novel insights into salinity-related genes and marker discovery  Academic Article
• A genotype calling algorithm for the Illumina BeadArray platform  Academic Article
• A haplotype map of allohexaploid wheat reveals distinct patterns of selection on homoeologous genomes  Academic Article
• A hybrid expectation maximisation and MCMC sampling algorithm to implement Bayesian mixture model based genomic prediction and QTL mapping  Academic Article
• A method to incorporate prior information into score test for genetic association studies  Academic Article
• A new approach to primer design for the control of PCR bias in methylation studies  Academic Article
• A note on a paper by Erik Volz: SIR dynamics in random networks  Academic Article
• A novel role for the pol I transcription factor ubtf in maintaining genome stability through the regulation of highly transcribed pol II genes  Academic Article
• A qualitative study of the factors that influence mothers when choosing drinks for their young children  Academic Article
• A quantitative map of protein sequence space for the cis-defensin superfamily  Academic Article
• A symmetric supercapacitor/biofuel cell hybrid device based on enzyme-modified nanoporous gold: An autonomous pulse generator  Academic Article
• A systematic strategy for the discovery of candidate genes responsible for phenotypic variation  Conference Paper
• Activity map of the tammar X chromosome shows that marsupial X inactivation is incomplete and escape is stochastic  Academic Article
• Advanced Algorithms of Bioinformatics  Editorial Article
• Advances in bioinformatics: Selected papers from APBC 2014 [Editorial]  Editorial Article
• Alcohol and energy drinks: a pilot study exploring patterns of consumption, social contexts, benefits and harms  Academic Article
• AlignStat: a web-tool and R package for statistical comparison of alternative multiple sequence alignments  Academic Article
• An In Vitro Assay of β-Galactosidase from Yeast  Academic Article
• An evaluation of human protein-protein interaction data in the public domain  Academic Article
• An interaction map of circulating metabolites, immune gene networks, and their genetic regulation  Academic Article
• An overview of the serpin superfamily  Academic Article
• An oxygen-independent and membrane-less glucose biobattery/supercapacitor hybrid device  Academic Article
• Analyses of inter-individual variations of sperm DNA methylation and their potential implications in cattle  Academic Article
• Analysis of pooled genome sequences from Djallonke and Sahelian sheep of Ghana reveals co-localisation of regions of reduced heterozygosity with candidate genes for disease resistance and adaptation to a tropical environment  Academic Article
• Analysis on relationship between extreme pathways and correlated reaction sets  Academic Article
• Analytic solutions for calcium ion fertilisation waves on the surface of eggs – erratum  Other Publication
• Analytic solutions for calcium ion fertilisation waves on the surface of eggs.  Academic Article
• Antagonistic, overlapping and distinct responses to biotic stress in rice (Oryza sativa) and interactions with abiotic stress  Academic Article
• Antibody-Based Approach to High-Volume Genotyping for MIC-1 Polymorphism  Academic Article
• Application of a Bayesian non-linear model hybrid scheme to sequence data for genomic prediction and QTL mapping  Academic Article
• Applied Bioinformatics  Journal
• Are homologies in vertebrate sex determination due to shared ancestry or to limited options?  Academic Article
• Assessing Modularity Using a Random Matrix Theory Approach  Academic Article
• Assessing Modularity Using a Random Matrix Theory Approach  Academic Article
• Attentional multi-level representation encoding based on convolutional and variance autoencoders for lncRNA–disease association prediction  Academic Article
• BMC Bioinformatics  Journal
• BMC Genomics  Journal
• BMC Research Notes  Journal
• BMC Systems Biology  Journal
• BeadArray Expression Analysis Using Bioconductor  Academic Article
• Bio-psychosocial determinants of cardiovascular disease in a rural population on Crete, Greece: formulating a hypothesis and designing the SPILI-III study  Academic Article
• BioTechniques: the journal of laboratory technology for bioresearch  Journal
• Bioinformatic approaches for predicting substrates of proteases  Academic Article
• Bioinformatics  Journal
• Bioinformatics in protein kinases regulatory network and drug discovery  Academic Article
• Biology Direct  Journal
• Biosensors and Bioelectronics  Journal
• Biosystems  Journal
• Bird-like sex chromosomes of platypus imply recent origin of mammal sex chromosomes  Academic Article
• Briefings in Bioinformatics  Journal
• Bulletin of Mathematical Biology  Journal
• Cancer and programmed cell death  Conference Paper
• Characterizing homozygosity across United States, New Zealand and Australian Jersey cow and bull populations  Academic Article
• Combined genotype and haplotype tests for region-based association studies  Academic Article
• Combining accurate tumor genome simulation with crowdsourcing to benchmark somatic structural variant detection  Academic Article
• Comparative analysis of the ATRX promoter and 5' regulatory region reveals conserved regulatory elements which are linked to roles in neurodevelopment, alpha-globin regulation and testicular function  Academic Article
• Comparative analysis of the predicted secretomes of Rosaceae scab pathogens Venturia inaequalis and V. pirina reveals expanded effector families and putative determinants of host range  Academic Article
• Comparative genomics reveals the distinct evolutionary trajectories of the robust and complex coral lineages  Academic Article
• Comparative study of computational methods to detect the correlated reaction sets in biochemical networks  Academic Article
• Comparing allele specific expression and local expression quantitative trait loci and the influence of gene expression on complex trait variation in cattle  Academic Article
• Comparison of similarity-based tests and pooling strategies for rare variants  Academic Article
• Complex Events in the Evolution of the Human Pseudoautosomal Region 2 (PAR2)  Academic Article
• Comprehensive genetic dissection of wood properties in a widely-grown tropical tree: Eucalyptus  Academic Article
• Computational Biology and Chemistry  Journal
• Computational developments in microRNA-regulated protein-protein interactions  Academic Article
• Correlating gene and protein expression data using Correlated Factor Analysis  Academic Article
• Coupling osmium complexes to epoxy-functionalised polymers to provide mediated enzyme electrodes for glucose oxidation  Academic Article
• Critical-like self-organization and natural selection: Two facets of a single evolutionary process?  Academic Article
• Cross-sectional examination of musculoskeletal conditions and multimorbidity: influence of different thresholds and definitions on prevalence and association estimates  Academic Article
• Crystal structure of human L-xylulose reductase holoenzyme: Probing the role of Asn107 with site-directed mutagenesis  Academic Article
• Current Bioinformatics  Journal
• DECENT: differential expression with capture efficiency adjustmeNT for single-cell RNA-seq data  Academic Article
• De novo assembly and characterisation of the field pea transcriptome using RNA-Seq  Academic Article
• Detailed phenotyping identifies genes with pleiotropic effects on body composition  Academic Article
• Detection of the transforming AKT1 mutation E17K in non-small cell lung cancer by high resolution melting  Academic Article
• Determination of the DNA repair pathways utilised by acute lymphoblastic leukaemia cells following daunorubicin treatment  Academic Article
• Determining common insertion sites based on retroviral insertion distribution across tumors  Academic Article
• Determining the polysaccharide composition of plant cell walls  Academic Article
• Development and application of a modified dynamic time warping algorithm (DTW-S) to analyses of primate brain expression time series  Academic Article
• Development of a porcine skeletal muscle cDNA microarray: Analysis of differential transcript expression in phenotypically distinct muscles  Academic Article
• Development of a porcine skeletal muscle cDNA microarray: analysis of differential transcript expression in phenotypically distinct muscles  Academic Article
• Differential Divergence of Three Human Pseudoautosomal Genes and Their Mouse Homologs: Implications for Sex Chromosome Evolution  Academic Article
• Direct analysis of FACS-sorted hemopoietic cell fractions using FISH  Academic Article
• Direct serogrouping of Dichelobacter nodosus from Victorian farms using conventional multiplex polymerase chain reaction  Academic Article
• Discovery and analysis of consistent active sub-networks in cancers  Conference Paper
• Does the human X contain a third evolutionary block? Origin of genes on human Xp11 and Xq28  Academic Article
• Dynamic modelling reveals 'hotspots' on the pathway to enzyme-substrate complex formation  Academic Article
• Dynamical Systems for Discovering Protein Complexes and Functional Modules from Biological Networks  Academic Article
• EDITORIAL  Editorial Article
• EVpedia: a community web portal for extracellular vesicles research  Academic Article
• EXIMS: an improved data analysis pipeline based on a new peak picking method for EXploring Imaging Mass Spectrometry data  Academic Article
• Edge-Based Compartmental Modelling of an SIR Epidemic on a Dual-Layer Static–Dynamic Multiplex Network with Tunable Clustering  Academic Article
• Editorial  Academic Article
• Editorial  Editorial Article
• Editorial  Editorial Article
• Editorial  Editorial Article
• Effect of the 5-HT4 receptor agonist tegaserod on the expression of GRK2 and GRK6 in the rat gastrointestinal tract  Academic Article
• Effectively Identifying Compound-Protein Interactions by Learning from Positive and Unlabeled Examples  Academic Article
• Effects of Heterogeneous and Clustered Contact Patterns on Infectious Disease Dynamics  Academic Article
• Empirical array quality weights in the analysis of microarray data  Academic Article
• Ensuring privacy and security of genomic data and functionalities  Academic Article
• Epidemiological consequences of enduring strain-specific immunity requiring repeated episodes of infection  Academic Article
• Erratum to: Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development  Erratum
• Establishing a distributed national research infrastructure providing bioinformatics support to life science researchers in Australia  Other Publication
• Estimating clonal heterogeneity and interexperiment variability with the bifurcating autoregressive model for cell lineage data  Academic Article
• Estimation of the reproduction number of dengue fever from spatial epidemic data  Academic Article
• Evaluation of loop-mediated isothermal amplification (LAMP) assay for detection of aprV2 positive Dichelobacter nodosus in-field by secondary users  Academic Article
• Evolution and comparative analysis of the MHC Class III inflammatory region  Academic Article
• Evolutionary history of novel genes on the tammar wallaby Y chromosome: Implications for sex chromosome evolution  Academic Article
• Exploiting multi-layered information to iteratively predict protein functions  Academic Article
• Exploring Multicollinearity Using a Random Matrix Theory Approach  Academic Article
• Exploring consensus RNA substructural patterns using subgraph mining  Academic Article
• Exploring multicollinearity using a random matrix theory approach  Academic Article
• Extensive transcriptomic and epigenomic remodelling occurs during Arabidopsis thaliana germination  Academic Article
• FLP/FRT-mediated conditional mutagenesis in pre-erythrocytic stages of Plasmodium berghei  Academic Article
• FastSpar: rapid and scalable correlation estimation for compositional data  Academic Article
• Finding rule groups to classify high dimensional gene expression datasets  Academic Article
• FlashPCA2: principal component analysis of Biobank-scale genotype datasets  Other Publication
• Founder population-specific HapMap panel increases power in GWA studies through improved imputation accuracy and CNV tagging  Academic Article
• Function Annotation for Pseudoknot Using Structure Similarity  Academic Article
• Functional characterization of Gram-negative bacteria from different genera as multiplex cadmium biosensors  Academic Article
• Further developments towards a genome-scale metabolic model of yeast  Academic Article
• GPs' decision-making when prescribing medicines for breastfeeding women: Content analysis of a survey  Academic Article
• GRIDSS: sensitive and specific genomic rearrangement detection using positional de Bruijn graph assembly  Academic Article
• GUEST EDITOR'S INTRODUCTION: ADVANCED TECHNIQUES FOR BIOINFORMATICS  Academic Article
• GWIS - model-free, fast and exhaustive search for epistatic interactions in case-control GWAS  Academic Article
• Genome Biology: biology for the post-genomic era  Journal
• Genome Research  Journal
• Genome Variants Associated with RNA Splicing variations in Bovine are Extensively Shared Between Tissues  Academic Article
• Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development  Academic Article
• Genome wide association and genomic prediction for growth traits in juvenile farmed Atlantic salmon using a high density SNP array  Academic Article
• Genome wide association study reveals novel QTL for barley yellow dwarf virus resistance in wheat  Academic Article
• Genome-wide SNP identification in multiple morphotypes of allohexaploid tall fescue (Festuca arundinacea Schreb)  Academic Article
• Genome-wide identification of conserved intronic non-coding sequences using a Bayesian segmentation approach.  Academic Article
• Genomic characterization of two novel pathogenic avipoxviruses isolated from pacific shearwaters (Ardenna spp.)  Academic Article
• Genomic sequence analysis reveals diversity of Australian Xanthomonas species associated with bacterial leaf spot of tomato, capsicum and chilli  Academic Article
• Global transcriptome analysis of AtPAP2 - overexpressing Arabidopsisthaliana with elevated ATP  Academic Article
• Grouping miRNAs of similar functions via weighted information content of gene ontology  Academic Article
• Guest Editorial for the 12th Asia Pacific Bioinformatics Conference  Editorial Article
• Guest Editorial for the 13th Asia Pacific Bioinformatics Conference  Academic Article
• Guest Editorial for the 14th Asia Pacific Bioinformatics Conference  Editorial Article
• Guest Editorial for the 14th Asia Pacific Bioinformatics Conference (APBC2016)  Editorial Article
• Guest Editorial for the 15th Asia Pacific Bioinformatics Conference  Editorial Article
• Guest Editorial for the 16th Asia Pacific Bioinformatics Conference  Editorial Article
• Guest Editorial: Advanced Algorithms of Bioinformatics  Editorial Article
• Guest Editorial: Application and Development of Bioinformatics  Editorial Article
• Healing rates in diabetes-related foot ulcers using low frequency ultrasonic debridement versus non-surgical sharps debridement: a randomised controlled trial  Academic Article
• Highly selective trapping of enteropathogenic E. coli on Fabry–Pérot sensor mirrors  Academic Article
• IDENTIFYING CO-REGULATING MICRORNA GROUPS  Academic Article
• IEEE/ACM Transactions on Computational Biology and Bioinformatics  Journal
• Identification and characterisation of microRNAs and their target genes in phosphate-starved Nicotiana benthamiana by small RNA deep sequencing and 5’RACE analysis  Academic Article
• Identification of a dimeric KDG aldolase from Agrobacterium tumefaciens  Academic Article
• Identification of a non-purple tartrate-resistant acid phosphatase: an evolutionary link to Ser/Thr protein phosphatases?  Academic Article
• Identification of protein complexes by integrating multiple alignment of protein interaction networks  Academic Article
• Identification of recurrent regions of copy-number variants across multiple individuals  Academic Article
• Identification of the bona fide DHDPS from a common plant pathogen  Academic Article
• Identifying interactions between kinases and substrates based on protein-protein interaction network  Academic Article
• Illumina WG-6 BeadChip strips should be normalized separately  Academic Article
• Immunobead RT-PCR: A Sensitive Method for Detection of Circulating Tumor Cells  Academic Article
• Inferring LncRNA-disease associations based on graph autoencoder matrix completion  Academic Article
• Information Integration in Molecular Bioscience  Academic Article
• Inhibitor of apoptosis proteins and their relatives : IAPs and other BIRPs  Academic Article
• Inhibitor of apoptosis proteins and their relatives: IAPs and other BIRPs  Academic Article
• Insights into Bacterial Genome Composition through Variable Target GC Content Profiling  Academic Article
• Interfilament forces in striated muscle  Academic Article
• International Journal of Bioinformatics Research and Applications  Journal
• International Journal of Bioinformatics Research and Applications: Editorial  Academic Article
• International Journal of Data Mining and Bioinformatics  Journal
• Introduction to the special issue on GIW 2016  Editorial Article
• Intron retention enhances gene regulatory complexity in vertebrates  Academic Article
• Investigation of regions impacting inbreeding depression and their association with the additive genetic effect for United States and Australia Jersey dairy cattle  Academic Article
• Isolation and characterization of two plasmids in a clinical Acinetobacter nosocomialis strain  Academic Article
• Joint estimation of isoform expression and isoform-specific read distribution using multisample RNA-Seq data  Academic Article
• Journal of Bioinformatics and Computational Biology  Journal
• Journal of Biological Systems  Journal
• Journal of Computational Biology  Journal
• Journal of Mathematical Biology  Journal
• KERNEL-BASED NAIVE BAYES CLASSIFIER FOR BREAST CANCER PREDICTION  Academic Article
• Kernel methods and haplotypes used in selection of sparse DNA markers for protein yield in dairy cattle  Academic Article
• Liver proteome response of pre-harvest Atlantic salmon following exposure to elevated temperature  Academic Article
• MISCORE: a new scoring function for characterizing DNA regulatory motifs in promoter sequences  Academic Article
• MLPAstats: An R GUI package for the integrated analysis of copy number alterations using MLPA data  Academic Article
• MLPAstats: an R GUI package for the integrated analysis of copy number alterations using MLPA data.  Academic Article
• Magnetic quantitative reverse transcription PCR: A high-throughput method for mRNA extraction and quantitative reverse transcription PCR  Academic Article
• Managing chronic hepatitis B: A qualitative study exploring the perspectives of people living with chronic hepatitis B in Australia  Academic Article
• MapReduce for accurate error correction of next-generation sequencing data  Academic Article
• Marsupials and monotremes sort genome treasures from junk  Academic Article
• Mathematical Biosciences  Journal
• Mathematical Medicine and Biology  Journal
• Mean-field models for non-Markovian epidemics on networks  Academic Article
• Mergeomics: multidimensional data integration to identify pathogenic perturbations to biological systems  Academic Article
• Meta-analysis of sequence-based association studies across three cattle breeds reveals 25 QTL for fat and protein percentages in milk at nucleotide resolution  Academic Article
• Metabolic classification of microbial genomes using functional probes  Academic Article
• Metabonomic, transcriptomic, and genomic variation of a population cohort  Academic Article
• MethPat: a tool for the analysis and visualisation of complex methylation patterns obtained by massively parallel sequencing  Academic Article
• Methylation Analysis of Formalin-Fixed, Paraffin-Embedded Sections Using a Nontoxic DNA Extraction Protocol  Academic Article
• Methylation-sensitive high-resolution melting  Academic Article
• Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat  Academic Article
• Mining featured patterns of MiRNA interaction based on sequence and structure similarity  Academic Article
• Mining frequent patterns for AMP-activated protein kinase regulation on skeletal muscle  Academic Article
• Mitochondrial and nuclear genetic analyses of the tropical black-lip rock oyster (Saccostrea echinata) reveals population subdivision and informs sustainable aquaculture development  Academic Article
• Model hierarchies in edge-based compartmental modeling for infectious disease spread  Academic Article
• Molecular Systems Biology  Journal
• Monitoring the progression of cell death and the disassembly of dying cells by flow cytometry  Academic Article
• Multi-platform segmentation for joint detection of copy number variants  Academic Article
• Multibreed genome wide association can improve precision of mapping causative variants underlying milk production in dairy cattle  Academic Article
• Multiplex-Ready PCR: A new method for multiplexed SSR and SNP genotyping  Academic Article
• Mutation Detection Using Mass Spectrometric Separation of Tiny Oligonucleotide Fragments  Academic Article
• Nature Protocols  Journal
• NetPath: a public resource of curated signal transduction pathways  Academic Article
• No evidence for promoter region methylation of the succinate dehydrogenase and fumarate hydratase tumour suppressor genes in breast cancer  Academic Article
• Novel approach for identification of influenza virus host range and zoonotic transmissible sequences by determination of host-related associative positions in viral genome segments  Academic Article
• Novel insights on the mechanism of action of α-amylase inhibitors from the plant defensin family  Academic Article
• Opportunities and challenges in long-read sequencing data analysis  Academic Article
• Optical and physical mapping with local finishing enables megabase-scale resolution of agronomically important regions in the wheat genome  Academic Article
• Origin and evolution of candidate mental retardation genes on the human X chromosome (MRX)  Academic Article
• PLoS Computational Biology  Journal
• PMA: Protein Microarray Analyser, a user-friendly tool for data processing and normalization  Academic Article
• POEM, A 3-Dimensional exon taxonomy and patterns in untranslated exons  Academic Article
• POPS: A COMPUTATIONAL TOOL FOR MODELING AND PREDICTING PROTEASE SPECIFICITY  Academic Article
• PROSPERous: high-throughput prediction of substrate cleavage sites for 90 proteases with improved accuracy  Academic Article
• Pairwise RNA secondary structure alignment with conserved stem pattern  Academic Article
• Paramutation-like features of multiple natural epialleles in tomato  Academic Article
• Partial automation of database processing of simulation outputs from L-systems models of plant morphogenesis  Academic Article
• Particle generation, functionalization and sortase A–mediated modification with targeting of single-chain antibodies for diagnostic and therapeutic use  Academic Article
• Phylogenetic relationship between Australian Fusarium oxysporum isolates and resolving the species complex using the multispecies coalescent model  Academic Article
• Phylogenomic incongruence in Ceratocystis: a clue to speciation?  Academic Article
• Phylogeny of the Serpin Superfamily: Implications of Patterns of Amino Acid Conservation for Structure and Function  Academic Article
• Poly(l-lysine)-mediated immobilisation of oligonucleotides on carboxy-rich polymer surfaces  Academic Article
• Powerful differential expression analysis incorporating network topology for next-generation sequencing data  Academic Article
• Predicting probable Alzheimer’s disease using linguistic deficits and biomarkers  Academic Article
• Prediction of drug adverse events using deep learning in pharmaceutical discovery  Academic Article
• Preparation of plant cells for transmission electron microscopy to optimize immunogold labeling of carbohydrate and protein epitopes  Academic Article
• ProBAPred: Inferring protein-protein binding affinity by incorporating protein sequence and structural features  Academic Article
• Proteins: Structure, Function, and Bioinformatics  Journal
• Proteomics informed by transcriptomics for characterising differential cellular susceptibility to Nelson Bay orthoreovirus infection  Academic Article
• Putative bovine topological association domains and CTCF binding motifs can reduce the search space for causative regulatory variants of complex traits  Academic Article
• PyMS: a Python toolkit for processing of gas chromatography-mass spectrometry (GC-MS) data. Application and comparative study of selected tools  Academic Article
• RNA-seq analysis identifies an intricate regulatory network controlling cluster root development in white lupin  Academic Article
• Rapid Selection against Truncation Mutants in Yeast Reverse Two-Hybrid Screens  Academic Article
• Regulatory and coding genome regions are enriched for trait associated variants in dairy and beef cattle  Academic Article
• Repeat Participation in Annual Cross-Sectional Surveys of Drug Users and its Implications for Analysis  Academic Article
• Replication of epistatic DNA loci in two case-control GWAS studies using OPE algorithm  Conference Paper
• SOMEA: self-organizing map based extraction algorithm for DNA motif identification with heterogeneous model  Academic Article
• Screening Procedure for Pichia pastoris Clones Containing Multiple Copy Gene Inserts  Academic Article
• Seasonality in risk of pandemic influenza emergence  Academic Article
• Select Cluster Features for Better Layered Protein Function Prediction  Academic Article
• Selection and affinity maturation of IgNAR variable domains targeting Plasmodium falciparum AMA1  Academic Article
• Selection of a variant of Geobacter sulfurreducens with enhanced capacity for current production in microbial fuel cells  Academic Article
• Semantically predicting protein functions based on protein functional connectivity  Academic Article
• Sensitive detection of multiple pathogens using a single DNA probe  Academic Article
• Separation of integument and nuclear tissues from cotton ovules (Gossypium hirsutum L.) for both high-and low-throughput molecular applications  Academic Article
• Sequence and gene content of a large fragment of a lizard sex chromosome and evaluation of candidate sex differentiating gene R-spondin 1  Academic Article
• Sequence-Based Prediction of Enzyme Thermostability Through Bioinformatics Algorithms  Academic Article
• Serpins in theCaenorhabditis elegans genome  Academic Article
• Shark IgNAR antibody mimotopes target a murine immunoglobulin through extended CDR3 loop structures  Academic Article
• Short read sequence typing (SRST): multi-locus sequence types from short reads  Academic Article
• Single-Step Method for the Determination of the Amount of the Common Deletion in Mitochondrial DNA  Academic Article
• SparSNP: Fast and memory-efficient analysis of all SNPs for phenotype prediction  Academic Article
• Statistical Analysis of TATA Box and Its Extensions in the Promoters of Human Genes  Academic Article
• Statistical Applications in Genetics and Molecular Biology  Journal
• Statistical challenges associated with detecting copy number variations with next-generation sequencing  Academic Article
• Structural and Dynamic Requirements for Optimal Activity of the Essential Bacterial Enzyme Dihydrodipicolinate Synthase  Academic Article
• Structure of human aldose reductase holoenzyme in complex with Statil: An approach to structure-based inhibitor design of the enzyme  Academic Article
• Structure of the tetrameric form of human L-Xylulose reductase: Probing the inhibitor-binding site with molecular modeling and site-directed mutagenesis  Academic Article
• Subtractive single-chain antibody (scFv) phage-display: tailoring phage-display for high specificity against function-specific conformations of cell membrane molecules  Academic Article
• Temperature Switch PCR (TSP): Robust assay design for reliable amplification and genotyping of SNPs  Academic Article
• The Bulletin of mathematical biophysics  Journal
• The Dictyostelium genome encodes numerous RasGEFs with multiple biological roles.  Academic Article
• The Ninth Asia Pacific Bioinformatics Conference (APBC2011) INTRODUCTION [Editorial]  Editorial Article
• The genome of the Black Bengal goat (Capra hircus)  Academic Article
• The multiple sex chromosomes of platypus and echidna are not completely identical and several share homology with the avian Z  Academic Article
• The role of quantitative structure - activity relationships (QSAR) in biomolecular discovery  Academic Article
• Topology-aware illumination design for volume rendering  Academic Article
• Tracking the evolution of cancer cell populations through the mathematical lens of phenotype-structured equations  Academic Article
• Transcriptome sequencing of field pea and faba bean for discovery and validation of SSR genetic markers  Academic Article
• Transcriptome sequencing of lentil based on second-generation technology permits large-scale unigene assembly and SSR marker discovery  Academic Article
• Transcriptome-scale homoeolog-specific transcript assemblies of bread wheat  Academic Article
• Transcriptomic Coordination in the Human Metabolic Network Reveals Links between n-3 Fat Intake, Adipose Tissue Gene Expression and Metabolic Health  Academic Article
• Transcriptomic analysis of wheat near-isogenic lines identifies PM19-A1 and A2 as candidates for a major dormancy QTL  Academic Article
• Transcriptomics technologies  Academic Article
• Tri-mean-based statistical differential gene expression detection  Academic Article
• Twenty years of bioinformatics research for protease-specific substrate and cleavage site prediction: a comprehensive revisit and benchmarking of existing methods.  Academic Article
• Ultrahigh resolution drug design. II. Atomic resolution structures of human aldose reductase holoenzyme complexed with fidarestat and minalrestat: Implications for the binding of cyclic imide inhibitors  Academic Article
• Useful Vectors for the Two-Hybrid System in Mammalian Cells  Academic Article
• Validation of a primer optimisation matrix to improve the performance of reverse transcription – quantitative real-time PCR assays  Academic Article
• Variance explained by whole genome sequence variants in coding and regulatory genome annotations for six dairy traits  Academic Article
• What makes a mitochondrion?  Academic Article
• Why genes persist in organelle genomes  Academic Article
• Widespread splicing changes in human brain development and aging  Academic Article
• bammds: a tool for assessing the ancestry of low-depth whole-genome data using multidimensional scaling (MDS)  Academic Article
• featureCounts: an efficient general purpose program for assigning sequence reads to genomic features  Academic Article
• g you The direct determination of haplotypes from extended regions of genomic DNA  Academic Article
• miREM: an expectation-maximization approach for prioritizing miRNAs associated with gene-set  Academic Article
• scClassify: sample size estimation and multiscale classification of cells using single and multiple reference  Academic Article
• voom: precision weights unlock linear model analysis tools for RNA-seq read counts  Academic Article